Protein

Protein accession
7bd3q [EnVhog]
Representative
4VDTp
Source
EnVhog (cluster: phalp2_39458)
Protein name
7bd3q
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MRGIDVSNHNGDINFNKVKEDNIEVVYIKATEGTTYKDPYLNQHYSGAKKAGLKTGFYHFLVGSSEPETQAENFYNNIKDKENDLKPCLDIETNNFNVMDYALRFVKRFEGLCKLPLCIYTGPYFANENLDSRLDKYSCWIAHYGVETPMETNIWKDSYAGHQFTETGRINGISTNVDINTFTEDIFTNNKTTGYVVTQYLPNGYNGDGSFNGIDLNYVLSYMKGIRCYTCGDSKGVWIETQTLPYSKCLELKETLGSWFYKIK
Physico‐chemical
properties
protein length:264 AA
molecular weight:30236,5 Da
isoelectric point:5,45
hydropathy:-0,56
Representative Protein Details
Accession
4VDTp
Protein name
4VDTp
Sequence length
308 AA
Molecular weight
34484,45630 Da
Isoelectric point
5,79385
Sequence
MKGIDISNHNGRIDWNKLKNSDVNLVYIKASEGTTYQDPYLNEHYQGAKAIGLPTGFYHYLKGTSAPESQALNFWSLIKDKENNLIPCLDIEENGFNVMDYALRFISKFKELSNLPILIYTGPYFANDNLDNRLASYPCWIAHYGVSSPMATNTWGTNYVGHQYTEKGSVPGINGNVDLNNFTEGILIKGDIENIVVNNNVNDVEDLGGNDIYSILQRELNKQGFRDKNGNKLKVDGRPGELTLSACPLVKKGAKGEITRWIQLRVGANPDTDFGQETENCVIWMQNKWGITPDGIVGKNTWKKLLGL
Other Proteins in cluster: phalp2_39458
Total (incl. this protein): 155 Avg length: 302,5 Avg pI: 6,51
Protein ID Length (AA) pI
4VDTp 308 5,79385
14kIh 258 8,48915
1GWen 269 7,81810
1Ky6y 245 4,67139
1kYTP 319 8,74606
1lVZG 344 6,25010
1lYru 307 5,71035
1r69I 377 6,33098
2A2ju 304 6,95649
2b9Z5 305 8,80176
2b9ge 301 8,99220
2ba42 300 5,96948
2lYBf 326 8,33062
2mvSB 291 5,00828
2mvj8 261 4,67008
2mwvd 330 4,92114
3AhRg 276 5,55336
3Akdp 314 4,61211
3If8h 298 8,82600
3Nz91 284 8,28659
3P8zg 310 4,36435
3QyKt 310 6,08685
3fxe0 307 4,10289
3uGdZ 298 8,91812
3uo4W 301 6,89340
4SFNd 277 8,76978
4UzYl 315 8,70931
4l1vP 332 6,00307
4lwdD 201 4,86254
4pK 307 6,30637
5Ms7L 305 8,43390
5O2pr 292 5,16112
5R46y 353 8,93759
5VpFh 298 8,38806
5hRow 316 5,44440
5hScP 263 4,72601
5hVA8 312 7,66254
5hY59 305 4,67088
5hYRU 309 4,54606
5inZ8 305 4,47672
62074 297 8,08687
66XTr 300 8,58791
6Pu86 337 5,34897
6PugB 317 4,62740
6WEPN 263 5,71973
6WFdJ 366 6,15796
6Wvcv 315 5,01078
6l8xv 298 8,57031
6p57P 297 8,38258
71QZ3 319 5,67290
71QZQ 317 5,62384
71R1O 321 5,60702
71R1T 279 5,27906
71R37 283 5,07273
71S11 344 6,39521
72927 262 4,78757
72vFw 291 8,88614
75LFt 261 4,78757
75zzQ 264 5,28633
76kXE 261 4,84390
76l0w 261 4,61916
797SK 340 8,52725
79K8Y 318 5,29082
79K9V 267 4,97872
79KaT 318 5,14793
79KjG 344 6,18177
79q6T 268 8,35512
7C2L0 340 8,70918
7RsMF 344 8,84927
7YQZ 414 6,32285
7bQhX 263 4,93626
7bQjQ 261 4,71419
7bQl2 261 4,93626
7bd2t 264 5,27815
7cW6m 331 5,47220
7czXe 355 9,09683
7deEW 344 8,53847
7deHr 339 7,59047
7dkSh 307 5,98545
7e6Bg 340 8,47800
7eQDt 264 5,57672
7eUE3 277 8,94114
7efhI 264 6,45750
7gAcD 344 9,05711
7gAcx 340 7,02640
7gDz2 366 5,67778
7gIt9 280 9,15337
7h4sV 340 8,52718
7hBxP 261 4,72601
7hey3 261 4,60580
7hfql 261 4,61916
7hfrc 262 4,79973
7iYt9 341 8,64226
7jj58 309 4,52571
7jjBh 327 5,14179
7jjC8 333 5,44020
7jjJ8 327 4,92842
7jjnb 261 4,71340
7kjTf 341 8,83264
7kkBw 267 5,26417
7kkbu 339 8,82580
7kkmR 345 9,05770
7kkvt 381 8,80711
7kkxL 345 8,72820
7lEce 368 6,11135
7llEI 264 5,52602
7llFx 264 5,59861
7lnDr 344 9,07916
7lnGm 355 8,78519
7lnoe 344 8,70338
7m5wR 295 4,52486
7m9ob 261 4,77518
7ojqu 261 4,85174
7p4Bh 261 4,79973
7p6Y6 261 4,77518
7tqHj 261 4,74994
7tqQU 261 4,89147
7tquh 261 4,85743
7tqwq 261 4,78757
7trBm 261 4,71737
7trt7 262 4,86874
7tsQg 262 4,75006
7tsTl 261 4,73818
7txEj 261 4,68384
7tzln 262 4,78757
7u24m 261 4,79973
7u28A 340 8,99677
7u2ck 340 8,88408
7uLKs 340 7,68431
7uLN7 344 8,44666
7uLYQ 264 5,40746
7uLYr 266 5,35517
7uyoL 380 8,25616
7v532 261 4,58403
7v53W 259 4,59540
7v58B 261 4,79973
7vFI6 313 8,67901
7vdCa 344 8,49495
7vdDm 341 8,74431
7vdMn 344 8,89723
7wMkX 319 8,88382
7z5QU 319 8,94230
82zkH 300 7,55483
83wvx 299 8,55942
8581h 303 5,21710
86YI2 324 6,52355
8Kfkm 302 7,01111
8i62Y 320 6,09674
8lqq6 297 8,71453
8oMRI 327 8,63452
Nvju 328 8,85952
Nvqs 333 8,91838
eIl6 307 4,47535
wer7 261 4,80610
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_34303
3xQtT
 28 45,2% 210 1.083E-62
2 phalp2_30706
7cHI2
 66 40,7% 216 1.320E-61
3 phalp2_2537
6a7No
 192 31,4% 340 2.465E-61
4 phalp2_1549
3LwuQ
 17 29,7% 316 1.375E-56
5 phalp2_9283
7cTgF
 101 38,4% 208 3.506E-56
6 phalp2_10644
2AeOK
 60 36,9% 214 6.233E-53
7 phalp2_9994
3h23S
 34 25,3% 430 1.162E-52
8 phalp2_12020
7Olig
 697 26,3% 322 5.805E-45
9 phalp2_34359
474YH
 38 27,3% 307 1.348E-41
10 phalp2_30061
2NCcc
 23 30,2% 225 4.811E-39

Domains

Domains
GH25
PG_1
Representative sequence (used for alignment): 4VDTp (308 AA)
Member sequence: 7bd3q (264 AA)
1 308 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4VDTp) rather than this protein.
PDB ID
4VDTp
Method AlphaFoldv2
Resolution 89.32
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50