Protein

Protein accession
1yBnb [EnVhog]
Representative
1yBnb (this protein)
Source
EnVhog (cluster: phalp2_4106)
Protein name
1yBnb
Lysin probability
99%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MNFSEVEAKHRLPKGMLSTIAGIETGGHPDPDRAVSPKGAIGRFQLMPATAKELGVDPTDPQQNMEGGARYLRWLLDNTDNDVEKAVTAYNYGIGNVWKAEKNAKAVGGNWKDFVKAEESRNYLAKYNSSLGVGEAETQQAVLPKSIEMGQPQEVASAPQPQQVARKPSGGYIKSYLESYI
Physico‐chemical
properties
protein length:181 AA
molecular weight:19726,9 Da
isoelectric point:6,16
hydropathy:-0,65
Other Proteins in cluster: phalp2_4106
Total (incl. this protein): 4 Avg length: 208,5 Avg pI: 6,82
Protein ID Length (AA) pI
3MYb3 269 9,48087
8CAWF 192 5,67784
8yf3t 192 5,96641
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_6299
6TEAE
 47 44,1% 120 1.619E-21
2 phalp2_546
D4nQ
 40 40,7% 157 3.908E-18
3 phalp2_32795
2xoLt
 8 39,6% 131 1.192E-16
4 phalp2_23440
6BLF7
 1 37,6% 125 2.731E-13
5 phalp2_17520
5z96M
 10 32,8% 149 4.369E-12
6 phalp2_16329
5n5Gj
 32 35,5% 166 8.082E-12
7 phalp2_25246
42eCz
 1 32,0% 125 1.494E-11
8 phalp2_37875
4T4us
 3 34,9% 123 2.762E-11
9 phalp2_26445
1QCmS
 16 35,2% 122 3.754E-11
10 phalp2_21840
4nlmw
 65 32,8% 149 9.204E-09

Domains

Domains
SLT
Disordered region
Protein sequence: 1yBnb
1 181
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1yBnb
Method AlphaFoldv2
Resolution 81.99
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50