Protein

Protein accession
1rfV0 [EnVhog]
Representative
1rfV0 (this protein)
Source
EnVhog (cluster: phalp2_38814)
Protein name
1rfV0
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MKKIQTDCVTIYDFRDNRDNPPEPKRKYKRRGKVVERDPSTIIGVTIHQTAVKYGIREYQIRAAGGDRDLALAQRALRVACHAMSFHDGFVSMTNPLTWYVYHGNGFNATELGLEIDGNYPGLIGGQTWNKKAATNTTDTSIRAAQVALRQLVEDGREMGMPIEFIHAHRQSSATRRSDPGEELWNRVVLDFAVPVLGLKTEPGHTLRKGRPIPLEWDKDGIGSY
Physico‐chemical
properties
protein length:225 AA
molecular weight:25318,4 Da
isoelectric point:9,20
hydropathy:-0,59
Other Proteins in cluster: phalp2_38814
Total (incl. this protein): 73 Avg length: 241,5 Avg pI: 8,55
Protein ID Length (AA) pI
106PI 306 6,02109
14qUp 228 9,03352
1BBWV 301 5,61384
1IOFj 215 8,54685
1O58u 216 8,90987
1PWyg 198 8,88041
1UKCu 298 6,14278
1iGDc 230 9,07027
1iH2N 230 9,04184
1iKXA 228 9,33401
1nsug 228 9,06988
1ozaa 304 8,49585
1qme5 228 9,03352
1vH16 232 9,02024
24PW8 217 8,83277
2CV3P 230 9,66653
2jvNx 228 8,90452
2kPiJ 304 5,87195
2rPLM 298 7,81120
2tx0C 263 9,02810
2wJaA 234 9,26599
2zyR2 303 5,46589
30LEU 216 8,79873
33mKL 218 9,46094
37XL5 295 8,87080
37bC9 230 8,95712
3YQ0V 228 9,53541
3etMx 300 6,34990
3jajN 302 6,11135
449DK 200 9,42001
48JXW 228 8,91535
4A3g4 229 9,28250
4GCrJ 215 8,84733
4GDY8 232 8,94069
4GbHp 227 7,78909
4GfqH 228 7,81004
4Gk5R 289 6,23748
4LGVE 227 8,88460
4LYiV 230 9,53495
4Ngnq 222 8,98465
4OCpK 305 6,32433
4fV1R 301 8,56303
4ocHr 244 9,13918
50Xjz 228 9,21274
573aK 213 9,54379
5AyTC 213 9,33072
5CTiG 228 10,18757
5DhkP 221 9,74274
5ErYH 233 9,35135
5Erbk 198 9,55520
5IMql 190 7,90481
5Jviv 228 9,59678
5sOuH 222 8,68056
5yezk 207 9,00064
6HLIl 271 6,30284
6NX0y 239 8,97595
6OQej 228 9,82061
6Uq6L 229 9,34716
6Vf4Q 215 9,06105
7CAGa 276 6,08259
7DAqe 227 10,02756
87Upx 229 9,48312
8ba42 228 9,15653
8dG9f 224 9,51097
8dMY1 330 5,78856
8eKLZ 178 8,86229
8iPxQ 209 8,91690
8r3hU 229 9,16742
8r9v5 229 9,16065
f195 257 9,27038
jZrP 303 7,03408
ly7A 237 9,16291
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21712
3mZuj
 73 35,1% 219 7.911E-52
2 phalp2_15318
1kA5d
 1 33,0% 209 1.644E-49
3 phalp2_25202
243B0
 14 31,9% 219 4.066E-40
4 phalp2_3642
4U96a
 1 28,0% 157 2.116E-22
5 phalp2_10699
33bbo
 4 29,4% 221 4.005E-20
6 phalp2_26612
8jyh3
 8 27,6% 195 1.602E-18
7 phalp2_81
4UtFU
 2 23,3% 223 7.427E-18
8 phalp2_3335
38zOn
 4 20,7% 222 1.585E-16
9 phalp2_6793
80wfq
 6 24,1% 236 6.163E-15
10 phalp2_37862
4N8M9
 5 26,0% 188 2.819E-14

Domains

Domains
Unannotated
Protein sequence: 1rfV0
1 225
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1rfV0
Method AlphaFoldv2
Resolution 97.58
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50