Protein

Protein accession
1rf3V [EnVhog]
Representative
1rf3V (this protein)
Source
EnVhog (cluster: phalp2_6619)
Protein name
1rf3V
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MADYEIIPRAAWGAKPPTAPLSPMTQPDGWVVHYVGGPMQQDPTYAQSVSAVYNLQQGAFNGDNGEKYIDIPYNFLVDLNGRIFEGRGWDYKSGANGSSNYNGHAWAVCVLMGPGDGQPSDKNRLTQEAKDALSWLTREGAKRRPAVSYVKGHRDVYATHCPGDECYAYVSELNSNLHVVEVVPPIDWHALEGIAKFLNGLPVRLGDRGPVVASLNDLLILHGAPKTLKGEAYGYRTRVWVNHLKVAWGWQNTDGKAVGKPFGHELVTHK
Physico‐chemical
properties
protein length:270 AA
molecular weight:29694,1 Da
isoelectric point:6,79
hydropathy:-0,43
Other Proteins in cluster: phalp2_6619
Total (incl. this protein): 4 Avg length: 276,5 Avg pI: 8,18
Protein ID Length (AA) pI
2Qoki 287 9,50117
2TsEa 262 6,96934
7J9Ih 287 9,45824
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36432
11r0n
 207 36,4% 173 4.864E-34
2 phalp2_15057
7s7pP
 172 34,7% 219 6.630E-34
3 phalp2_23216
7DAyW
 82 34,0% 191 2.368E-31
4 phalp2_39895
1eEek
 97 34,1% 170 5.981E-31
5 phalp2_15099
bgFu
 21 33,1% 184 2.800E-30
6 phalp2_26274
RjMA
 376 33,5% 197 3.813E-30
7 phalp2_15382
1LWAy
 5 29,9% 177 7.185E-28
8 phalp2_13210
2JwXt
 44 31,3% 182 1.329E-27
9 phalp2_30119
3eark
 30 30,2% 182 5.309E-26
10 phalp2_39859
14dHo
 34 28,1% 224 5.309E-26

Domains

Domains
Ami2
Unannotated
Protein sequence: 1rf3V
1 270
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1rf3V
Method AlphaFoldv2
Resolution 84.18
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50