Protein

Protein accession
1rd6i [EnVhog]
Representative
1rd6i (this protein)
Source
EnVhog (cluster: phalp2_6618)
Protein name
1rd6i
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MRPLRTLIASFILVRSTATFADPVWTEALIESAPVYLKANPGKAAKHADAALYASQQTGVSPEILLGIAYVESRYFSEVVSRMECVAEECHRAGGFWRSESRSSRFRGPYFCGALQVGGHVSWQRCRELISDLQENYLVAARHLQAWLDQPICHGNLRCALLGNAGGFPMIKANRSTYPQRCTRVARAIRRRYNRITAQQISQAVSSVP
Physico‐chemical
properties
protein length:209 AA
molecular weight:23316,5 Da
isoelectric point:9,71
hydropathy:-0,17
Other Proteins in cluster: phalp2_6618
Total (incl. this protein): 7 Avg length: 190,3 Avg pI: 9,10
Protein ID Length (AA) pI
1HLxX 184 8,94023
3Qxxh 180 9,53760
4Nd9k 191 8,51984
4coqa 192 8,89240
5t2XC 193 7,62321
8j5LN 183 10,49592
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_16827
1pFXl
 2 34,7% 141 7.997E-24
2 phalp2_4818
5fcnY
 5 30,9% 194 2.611E-18
3 phalp2_5686
4EEf5
 17 33,9% 162 5.684E-15
4 phalp2_14630
5B6j0
 2 28,9% 152 7.720E-15
5 phalp2_4707
4Mb0B
 4 30,1% 176 3.450E-12
6 phalp2_9787
8aXy2
 6 22,1% 158 1.049E-06

Domains

Domains
Disordered region
Unannotated
Protein sequence: 1rd6i
1 209
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1rd6i
Method AlphaFoldv2
Resolution 85.26
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50