Protein

Protein accession
6ycps [EnVhog]
Representative
4NLW9
Source
EnVhog (cluster: phalp2_5734)
Protein name
6ycps
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPVGTPLFAVANGKVSLLNDKSYGLVVVVAYEHDGVKYQDWFCHMSKQEVTNGQEVAAGAQLGLSGNTGNSTGPHLHLETRIAPFRYGNDVAHPILTIAGIVDPNAPIVKKPSIVAKVVAVAKPASPKTTKVLSFAGLQKGNADDIKLVQSALVDIVGASFVPNGKFGPQTTAAYKRWQEKLGYKGSAADGKPGKTSLAELGKRYGFTVI
Physico‐chemical
properties
protein length:210 AA
molecular weight:22113,1 Da
isoelectric point:9,50
hydropathy:-0,07
Representative Protein Details
Accession
4NLW9
Protein name
4NLW9
Sequence length
205 AA
Molecular weight
21649,43420 Da
Isoelectric point
9,39499
Sequence
MPVGTQLNSITEGTVVDTSFDKSYGNKVVVEYTQNGVKYQDWYCHLDKAEVAKGAAVCVGQPIGKSGNTGNSTGPHLHLETRIAPFRYGNDVAHPVLTIPGIVDAKAPAPAKPSVIAKVASIAKPAVPKANKVVNLKELLAGQADDVTLVQSALNVKTTGKWDAATTTAYRKWQESLGFKGKDADGKPGKTSLARLGSKYGFTVI
Other Proteins in cluster: phalp2_5734
Total (incl. this protein): 22 Avg length: 235,0 Avg pI: 9,55
Protein ID Length (AA) pI
4NLW9 205 9,39499
19yRq 244 9,59788
1ygjm 200 9,23466
38deo 244 9,64081
38mkg 240 9,43290
3MaNx 216 10,25964
3MbiD 216 10,09203
3Usvy 240 9,46178
3beeL 246 9,37791
49bQv 240 9,46178
4pjjc 240 9,61419
4pthv 244 9,35077
585SK 244 9,74332
58X92 244 9,69658
5c3r6 244 9,50337
5cMfS 240 9,46178
5lGtc 246 9,46952
5w9Xd 244 9,61283
6AzO1 237 9,25858
87m0Q 245 9,50079
8nCEF 240 9,46178
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27718
6SAtZ
 6 32,2% 180 1.060E-29
2 phalp2_4813
5d769
 4 30,1% 189 4.183E-20
3 phalp2_21800
4e6HN
 71 27,5% 127 5.132E-15

Domains

Domains
PET_M23
Unannotated
Representative sequence (used for alignment): 4NLW9 (205 AA)
Member sequence: 6ycps (210 AA)
1 205 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4NLW9) rather than this protein.
PDB ID
4NLW9
Method AlphaFoldv2
Resolution 72.62
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50