Protein

Protein accession
1rRtS [EnVhog]
Representative
1rRtS (this protein)
Source
EnVhog (cluster: phalp2_23856)
Protein name
1rRtS
Lysin probability
98%
PhaLP type
endolysin
Probability: 80% (predicted by ML model)
Protein sequence
MSKRELNISDKKLHRDTKEDIILKSPLRIPPKELQDLKNLKRLNITDYAYYDIAKSEYQKIDQLSIPPQTHYGGNDGFSRGEGGMKLGEEENPPFKYRQALHSNIAHENEIDNIPGSDYRNYNDPKLIKSNIINNLHELFQHCINPIFNKFGEDLALTSVYRNKKVNKLLGGVENSQHIYGYAADIVLLNNTPSSTLFNWCVFNIPQYHQLIWEYPERGNYSDYHPSFSWVHISYIKGDNYKINSVSSKDPKVHITYQDEDTFYLDNFTHRIALANPKLLKNQ
Physico‐chemical
properties
protein length:283 AA
molecular weight:32965,6 Da
isoelectric point:6,87
hydropathy:-0,77
Other Proteins in cluster: phalp2_23856
Total (incl. this protein): 3 Avg length: 229,0 Avg pI: 6,59
Protein ID Length (AA) pI
2AHCz 200 6,15472
rRX3 204 6,74778
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_6634
1xXaW
 70 52,1% 186 2.568E-70
2 phalp2_35662
1vvr1
 15 36,8% 201 3.760E-36
3 phalp2_19541
3FgdP
 22 40,3% 176 8.709E-31
4 phalp2_8264
3Vy7
 8 25,4% 177 4.310E-08

Domains

Domains
PET_M15
Protein sequence: 1rRtS
1 283
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08291

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1rRtS
Method AlphaFoldv2
Resolution 81.23
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50