Protein

Protein accession
6rpc2 [EnVhog]
Representative
3sMIn
Source
EnVhog (cluster: phalp2_34301)
Protein name
6rpc2
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VSGVNTDANRMIAQAQASGKKFGLYHYAMGGNPEAEAQFFWRNTSNYWRHGIVALDWEMDDNPAWGNWDWVRRFMAECERLSGGVRPLLYTGPVAGTIPQDIRNRYGLWIAQYANMSPTGYQASPWMIGAYGEAMRQYSGTGVVNTWSPIDLNIFRGEAWQWDLYANPTGSTAPAPATPAPVQPSTPPANTNTGGISHVMQWGETIWGLAVAHNAWPLSAWHTPSGDINRYYVGDVVTYGGGSTTAPSHGVSKVLQWGDTVWEFATSHGYNVSQCTVPSGNINVYYPGDVVTCR
Physico‐chemical
properties
protein length:294 AA
molecular weight:32305,5 Da
isoelectric point:5,76
hydropathy:-0,37
Representative Protein Details
Accession
3sMIn
Protein name
3sMIn
Sequence length
220 AA
Molecular weight
23757,13360 Da
Isoelectric point
5,37369
Sequence
MNECERLSGGVRPLLYTGPVAGTIPQDIRDRYGLWIAQYANMSPTGYQASPWMLGAYGEAMRQYSGTGVVNTWSPIDLNIFRGEAWQWDLYANPTGSTAPAPATPAPVQPSTPPANTNTGGISHVMQWGETIWGLAVAHNAWPLSAWHTPSGDINRYYVGDVVTYGGGSTTAPSHGVSKVLQWGDTVWEFATSHGYNVSQCTVPSGNINVYYPGDVVTCR
Other Proteins in cluster: phalp2_34301
Total (incl. this protein): 6 Avg length: 304,5 Avg pI: 5,45
Protein ID Length (AA) pI
3sMIn 220 5,37369
1lXiA 201 4,83066
5XOBo 389 5,46532
61FQj 371 6,22617
A0A8S5NIS0 352 5,02948
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17204
3jHSi
 3 90,2% 134 2.122E-85
2 phalp2_12160
6ljWQ
 2 36,6% 139 4.743E-20
3 phalp2_13670
5RffS
 11 34,1% 205 6.520E-18
4 phalp2_4894
5TthI
 1 30,6% 147 2.623E-08

Domains

Domains
Unannotated
Unannotated
Unannotated
Representative sequence (used for alignment): 3sMIn (220 AA)
Member sequence: 6rpc2 (294 AA)
1 220 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3sMIn) rather than this protein.
PDB ID
3sMIn
Method AlphaFoldv2
Resolution 74.14
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50