Protein

Protein accession
6qV0f [EnVhog]
Representative
1dRNc
Source
EnVhog (cluster: phalp2_39893)
Protein name
6qV0f
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAFKMRTGKPEAGNKYYITKANGGYSDAIKGSPTDKDCDVLSNCVGYAYGRFNEIGGYGYCKYLRPVNAENFIQYKGTALKTGQTPKLGACMVWQKGATLNGSDGAGHVAIVEKVVSDTEVYTSESGWGSSTPFWNKTRTKGNGNWGQGAAYKFLGFIYNPAVSDENPASTPTQSTSSNTDEKTIWDYLLGKIGNAYGVAGLMGNLYAESCLRPNNLQNTYETRLGYTDASYTAAVDSGSYTKFGTDSAGYGLAQWTYHTRKKALLAFAQSKRKSIGDLNMQLEFMYKELSESYKGVLADLKSAKTVLAASNSVLTKFERPANQGAAVQSKRAEYGQKYYEKYAGKTVSSTPQETEKETTNMGYTNSSLVSYTKLSPNNSGQRTHSIDRITPHCVVGQCSVETLGNIFAPTTKQASSNYGIGVDGRVGMYVEEKNRSWCSSSSENDQRAVTIECASDATAPYAFKDVVYNKLIELCVDICKRNGKNKLLWFGDKTKTLNYAPKSGEMVLTVHRWFANKSCPGDWMYARMGDLATKVTQKLSGGSVDTGKTDTTTDAKTLYRVQTGAFSKKSNADAFAAKLKAAGFSTYIVQVDKLYKVQVGAFANKTNAENMMAKLKAAGYDAFITTSSGSAVKSEPAKKTAAAIAKEIFCGTCSDSRWSTWGNGATRTSRLKQAGYDPAEVQAEVNKLF
Physico‐chemical
properties
protein length:690 AA
molecular weight:75001,3 Da
isoelectric point:9,18
hydropathy:-0,51
Representative Protein Details
Accession
1dRNc
Protein name
1dRNc
Sequence length
694 AA
Molecular weight
75508,08690 Da
Isoelectric point
9,27553
Sequence
MAFKMRTSKPEAGNKYYITKANGGYSDAIKGSPTDKDCDVLSNCVGYAYGRFNEIGGYGYCKYLRPVNAENFIQYKGIALKTGQTPKLGACMVWQKGATLNGSDGAGHVAIVEKVVSDTEVYTSESGWGSSTPFWNKTRTKGNGNWGQGTAYKFLGFIYNPAVSDEKPADTTPTPSTSGSTDEKTIWDYLLSKIGNEYGVAGLMGNLYAESCLRPNNLQNAYETRLGYTDASYTAAVDNGSYTKFGTDSAGYGLAQWTYHTRKKALLAFAQRKKKSIGDLNMQLEFMYKELSESYKGVLADLKSAKTVLAASNSVLTKYERPANQGAAVQSKRAEFGQKYYEKYAGKTVSSTPQETGKETTNMGYTNSSLVSYTKLSPNHSGQRTHSIDRITPHCVVGQCSVETLGNIFAPTSKQASCNYGIGVDGRVGMYVEEKNRSWCSSSAANDQRAITIECASDATAPYAFKDVVYNKLIELCVDICKRNGKNKLLWFGDKTKTLNYTPKSGEMVLTVHRWFANKSCPGDWMYARMGDLATKVTQKLSGGATDTGKTDTPTSDTTTLYRVQTGAFAKKANADAFAAKLKAAGFATYIVQIGGLYKVQVGAFAKKANAENMMAKLKAAGYSGFITTQTSTTTKSEPAKKTAAEIAKEIFYGTCSDSRWSTWGNGATRTSRLKQAGYNPSEVQAEVNKLFSK
Other Proteins in cluster: phalp2_39893
Total (incl. this protein): 8 Avg length: 707,0 Avg pI: 9,21
Protein ID Length (AA) pI
1dRNc 694 9,27553
5QCjx 694 9,32408
6624T 694 9,28353
67TV 808 8,84753
6m8XD 692 9,25407
7YXK2 692 9,23170
A0A8S5QR58 692 9,25800
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_38065
6q8ry
 127 39,1% 547 3.863E-79
2 phalp2_26355
1k2gh
 2 31,0% 538 2.402E-55

Domains

Domains
CHAP
Phage_lys2
Ami2
SPOR
CW_7
Representative sequence (used for alignment): 1dRNc (694 AA)
Member sequence: 6qV0f (690 AA)
1 694 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF05036, PF05257, PF08230, PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6qV0f
Method AlphaFoldv2
Resolution 86.32
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1dRNc) rather than this protein.
PDB ID
1dRNc
Method AlphaFoldv2
Resolution 85.49
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50