Protein

Protein accession
6pdnu [EnVhog]
Representative
75Rgb
Source
EnVhog (cluster: phalp2_28052)
Protein name
6pdnu
Lysin probability
95%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
HDWSAVASEYALWVAQYADNNTTGYQSNPWTDNKGYGAWNGPVIFQYSSSGRLAGYSENLDINIAYMDAAAWKAYAKGSGATPEPVPVPAPSTPTGSTLDLVYGVMTKKYGDGDARKAALGTRYNEVQDMINHIENSSAATLAEETKNGRYGNDPIRRTVLGKKYSAVQDIINGKASGTGSNAVYYTVKSGDTLSGIAEKYGTTYQKIAQLSGISNPNKIYVGQRVRVR
Physico‐chemical
properties
protein length:229 AA
molecular weight:24704,0 Da
isoelectric point:8,83
hydropathy:-0,55
Representative Protein Details
Accession
75Rgb
Protein name
75Rgb
Sequence length
159 AA
Molecular weight
16730,35700 Da
Isoelectric point
4,05003
Sequence
MGACAVPTDIWQFTSDGIVGGISGRVDSNYMYRDLRSVYTGQIPEPRPAVPAPAAPASTGNYTVQEGDTLSAIAALYGTSYQELAAINGIANPDLIYPGQVLQVTGNPQAPSSTTYTVESGDTLSAIADMYGTNYQHLAAINGIENPDLIYPGQVLQIE
Other Proteins in cluster: phalp2_28052
Total (incl. this protein): 8 Avg length: 208,8 Avg pI: 7,34
Protein ID Length (AA) pI
75Rgb 159 4,05003
1gEfa 161 9,08716
5TLGE 197 9,09728
6nq2I 233 9,43342
6sV3n 223 9,23324
7X1jM 152 4,54799
A0A4D6AST6 316 4,43494
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_29475
1HHLO
 21 68,3% 98 1.064E-37
2 phalp2_13670
5RffS
 11 35,8% 162 3.593E-24
3 phalp2_32517
1lz2n
 1 43,4% 122 1.397E-21
4 phalp2_26344
1gJRB
 4 32,8% 146 6.698E-21
5 phalp2_224
5VoQx
 6 28,6% 164 1.881E-18
6 phalp2_15728
3kqKZ
 1 29,8% 171 2.573E-18
7 phalp2_5680
4CMV3
 1 26,6% 154 4.810E-18
8 phalp2_17221
3xRQT
 3 31,6% 155 2.487E-15
9 phalp2_5364
2oeSV
 1 27,6% 206 1.799E-10
10 phalp2_144
5oGmc
 8 31,3% 188 2.131E-09

Domains

Domains
Disordered region
LysM
LysM
Representative sequence (used for alignment): 75Rgb (159 AA)
Member sequence: 6pdnu (229 AA)
1 159 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (75Rgb) rather than this protein.
PDB ID
75Rgb
Method AlphaFoldv2
Resolution 74.58
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50