Protein

Protein accession
1pmVz [EnVhog]
Representative
1pmVz (this protein)
Source
EnVhog (cluster: phalp2_35649)
Protein name
1pmVz
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MSKEAFVLQYQDVADRVGEKLNVNPQALLAQWGLETGWGKSIIPGTNNLGNIKDFSGKGVAAVDNLTKRQDNYRAYGSIDEFADDYVNLIKHRYPAAVGQKTAVGFASALKAGGYAEDPQYVQKIASITGEDYSPPTVRGTVKARYDSMI
Physico‐chemical
properties
protein length:150 AA
molecular weight:16337,1 Da
isoelectric point:6,58
hydropathy:-0,42
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_12209
6KNTf
 1 60,3% 121 4.252E-39
2 phalp2_15982
7KhMR
 2 38,3% 112 9.843E-16
3 phalp2_30397
4MmCW
 1 37,6% 138 2.516E-15
4 phalp2_14217
2Zowr
 1 32,8% 125 1.015E-10
5 phalp2_32724
8pNqF
 4 37,8% 111 1.657E-09
6 phalp2_14516
4U1py
 1 31,9% 141 2.260E-09
7 phalp2_12353
9R5C
 179 36,3% 143 3.080E-09
8 phalp2_5346
2cQBB
 648 37,1% 113 2.328E-07
9 phalp2_40144
8mbtZ
 2 31,2% 125 1.084E-06
10 phalp2_21183
12C1W
 594 29,7% 158 2.324E-05

Domains

Domains
GLUCO
Protein sequence: 1pmVz
1 150
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1pmVz
Method AlphaFoldv2
Resolution 91.08
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50