Protein

Protein accession
1pbSm [EnVhog]
Representative
1pbSm (this protein)
Source
EnVhog (cluster: phalp2_6609)
Protein name
1pbSm
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MVVELLLCCVTVPPVHAVELPPRQRVMAEYRDHGEPLRGRDVFRIARAVGFTPERARQVARIARCESRHQPRAHTNDPGTGDNSYGLMMINMIGDLGPARRKKYGLNSNAQLFDPVKNLRVAWRMSHGGRDWSPWSCARMVGLV
Physico‐chemical
properties
protein length:144 AA
molecular weight:16271,7 Da
isoelectric point:10,26
hydropathy:-0,41
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31496
3TtCH
 82 47,8% 92 1.648E-22
2 phalp2_33407
6UlU2
 34 42,3% 111 4.273E-19
3 phalp2_5240
852fn
 20 47,3% 95 9.878E-18
4 phalp2_8459
165nm
 626 36,7% 106 5.464E-10
5 phalp2_28148
am2L
 4 36,9% 92 7.458E-10
6 phalp2_13482
4MAqV
 1 38,8% 103 5.752E-08
7 phalp2_9463
ADPc
 1205 34,0% 141 1.068E-07
8 phalp2_6563
15km6
 6 32,8% 134 5.011E-07

Domains

Domains
SLT_3
Protein sequence: 1pbSm
1 144
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18896

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1pbSm
Method AlphaFoldv2
Resolution 92.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50