Protein

Protein accession
1pCYm [EnVhog]
Representative
1pCYm (this protein)
Source
EnVhog (cluster: phalp2_22544)
Protein name
1pCYm
Lysin probability
94%
PhaLP type
VAL
Probability: 98% (predicted by ML model)
Protein sequence
MPVVRPYPLGEVQPQGLPNAIPNVPAASDVASFGGNQARDLQVAGANLDKTSDIVATMALRQQALQDEADAKAADAGLANDIRALLFDPEKGYYAKRGKEAIDAAPGVLQALGDLKQKYNGSLKTGTSRRLYGDVADRRIGGLQTQIGEKVIAERRTYADQASAARVQNFVDDAGVNYTDQKQVEQAIAGAKSEILSHSEINHEPPAETQRKLRLVESKAISDVIKRWAEEDPYKAKAIRDANVGRIDSADGMALDKILKEQLLRRASQDSADEIRQGSRLPAAVEMRRPLIQAAAGAAGVTPALVAGVMAQESRGRDDAVSSARARGPMQLMPGTAKDLGVTDAHDADQAVPAGARYLKQQLDKYGDEKLALMAYNWGPGNVDNWIKAGSDPAKVPTETRDYVRKVQGYAARFDGSQAIPDMDPKTGRPTLQWQLDQTTKISDPDMRDATVQRLRVLHGQDEAVVVEARKEVGDQVLSLVMDGKLTDRGQIPADKWVALDPIQQRAMQSLLEANARGADIPPNPGLYAELMRQARRDPEAFKKRDLVPLASQLPPAHWTKFQDLQASMWQPENAASEKLDSMVRAMRMSDALLRSASIHLGHADSKSFDDFKARYMSVLDQEIDRYRAKNGKPPDDGELTKMADRLLLQGNFRGTGFFSEDRAVSFLQGKGDGAPQFYVRYRDIPLDKRTILETELKAAGRPYNKRAVENLYTALRLAGKQ
Physico‐chemical
properties
protein length:722 AA
molecular weight:79149,4 Da
isoelectric point:7,71
hydropathy:-0,58
Other Proteins in cluster: phalp2_22544
Total (incl. this protein): 3 Avg length: 753,0 Avg pI: 7,39
Protein ID Length (AA) pI
4SUfT 859 6,08242
A0A6J5MMN4 678 8,38407
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2664
6WyWF
 26 28,9% 792 1.248E-70
2 phalp2_27844
fq3d
 11 28,1% 736 4.002E-67
3 phalp2_31894
4JkOt
 8 24,1% 728 2.441E-42
4 phalp2_30318
4xP4a
 34 27,0% 676 5.654E-41
5 phalp2_31820
4oZMX
 2 24,2% 750 2.860E-37
6 phalp2_26463
1XwmP
 2 28,0% 559 2.523E-34
7 phalp2_35941
50WN2
 6 24,4% 778 5.588E-33
8 phalp2_35637
1oBtr
 46 24,3% 718 2.050E-22
9 phalp2_36440
13gEB
 2 23,7% 691 4.186E-17
10 phalp2_15591
2cFAD
 4 21,0% 684 3.852E-16

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1pCYm
Method AlphaFoldv2
Resolution 78.48
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50