Protein

Protein accession
1pCMB [EnVhog]
Representative
1pCMB (this protein)
Source
EnVhog (cluster: phalp2_8523)
Protein name
1pCMB
Lysin probability
98%
PhaLP type
endolysin
Probability: 94% (predicted by ML model)
Protein sequence
MNTPPKWFVLAQAELGVAETEGPKHTARVLEYFRLAGHPEISDDETAWCAAFACAMLELADVRSPRTLRARDFLDWGVAVTQARQGDVVVFRRGTNPKQGHVGFFDRWSPDGRKILVRGGNQSNAVRDQWYSVDDLLGFRRPMDEVHAPAPQAATTPAVVKTSRKWSLSEQWSRIQIALGLGTGGAVVGDQANVLPDIIGLVKKFATDHAGLLIVGGVVAGVLVSETIKQLVKQDVSDGRYTPSGEQ
Physico‐chemical
properties
protein length:247 AA
molecular weight:26912,2 Da
isoelectric point:6,97
hydropathy:-0,20
Other Proteins in cluster: phalp2_8523
Total (incl. this protein): 7 Avg length: 227,7 Avg pI: 8,07
Protein ID Length (AA) pI
11jFs 243 7,68409
1XLwo 256 6,12891
1jYRP 207 9,23344
2fuMv 213 9,09663
4v1ou 206 8,50024
6VRlB 222 8,86145
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_37918
4UqBP
 157 46,1% 154 1.240E-53
2 phalp2_17303
4eTLb
 16 48,4% 157 6.540E-51
3 phalp2_21703
3iJm5
 22 33,9% 215 1.837E-48
4 phalp2_32166
6PqA1
 486 40,5% 170 2.512E-48
5 phalp2_33123
4M8WF
 3 38,6% 168 2.748E-46
6 phalp2_27135
2Vze6
 4 36,6% 161 2.291E-39
7 phalp2_38999
8dFXu
 7 33,1% 205 3.130E-39
8 phalp2_37558
3GCv7
 1 36,5% 238 3.365E-37
9 phalp2_9646
1LfXa
 7 25,4% 165 9.597E-26
10 phalp2_20540
4muWr
 288 28,0% 175 1.136E-20

Domains

Domains
CHAP
Disordered region
Protein sequence: 1pCMB
1 247
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1pCMB
Method AlphaFoldv2
Resolution 71.97
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50