Protein

Protein accession
6dgs7 [EnVhog]
Representative
1KNyb
Source
EnVhog (cluster: phalp2_39979)
Protein name
6dgs7
Lysin probability
95%
PhaLP type
endolysin
Probability: 93% (predicted by ML model)
Protein sequence
MRKGQKLTKGGYQLLGFPMEYMNVTQGNNVGTHLGTNAMDNAGKDTGIDETIAPCDCHLVAYDSARNGNAVFLESDKKVLFRDGTIDFATFMFIHDNYIEDIKRVKYFKQGDTFGDEGTAGYATGNHSHMEVAKGKFSHMYDRNSHGVYHLPNNVSADLAFVTDGTVILNKGTFANWTDASHVPFNQGGGTTTGSASVLNGIPSDFVHEKATFYPACTIKIRRAPSLKGQDTGLTYIQGQHVNYDGYVRREGYVWISWIGGDGTRRWMACGELNSAGLNTSPYGTFK
Physico‐chemical
properties
protein length:287 AA
molecular weight:31503,8 Da
isoelectric point:6,59
hydropathy:-0,46
Representative Protein Details
Accession
1KNyb
Protein name
1KNyb
Sequence length
260 AA
Molecular weight
28937,89840 Da
Isoelectric point
9,08542
Sequence
MQYAKFPMKYVNITQVPNGGYTHKGRLTVDNAGKDAGIDNVLAPFDCKVVWKDLGSAKTGVLIENLNPLECADGVIRKAGSVLVIFWHDNDITNLQIGQIIRQGEVFYQEGTAGQATGNHLHFGVGIGPYKGGYPMVENEFGRYEIKNEIHPSNIFFIDDSNIVKNTKGMKWVKHTKDDVKVVDELAKVPDASFYIGEKVKIVGTHYANGMIVPAWAKRQTHVVGGLLSNRVRLVGEVRDKKVYKVGINSWFYTKDVVKV
Other Proteins in cluster: phalp2_39979
Total (incl. this protein): 59 Avg length: 284,2 Avg pI: 7,00
Protein ID Length (AA) pI
1KNyb 260 9,08542
1EkF9 287 6,91159
1Lns5 234 7,89043
1oxJx 297 8,36195
3kdN5 287 6,54338
3l2ll 287 6,78887
3m04q 287 7,14144
3sfPh 287 6,79018
3sv6M 287 6,78495
3uE49 301 6,79126
3vHjC 287 6,54253
3vzTJ 287 6,74783
3y0ko 287 7,11092
4xEOc 297 7,60411
5LM9C 286 7,14082
5Mxqw 287 7,10575
5NXQx 287 7,11092
5P2t6 287 6,35383
5QTjI 287 7,10575
5TByH 287 6,78921
5TZwk 287 7,11035
5TeJd 287 7,11052
5U7YK 287 7,14139
5Wuhf 287 6,54321
5X6HV 287 6,54265
5ZVBv 287 6,49530
615Rt 287 6,54344
62fsi 289 8,45743
63dI9 287 7,14048
63ljB 287 6,54191
64f6q 287 7,68892
667WG 287 6,54589
68TxU 287 6,78808
68Uqo 287 6,78791
69jkq 312 5,94606
6at36 287 6,54651
6bq0i 287 6,74602
6cYqQ 287 6,18882
6dsCf 287 7,11621
6eM48 287 6,54338
6glFL 287 6,74806
6hVvr 289 7,13673
6iJc5 287 6,54492
6kEVV 287 6,78887
6m0DR 287 6,23782
6mIiS 287 7,08353
6pLxy 287 6,74715
6pQ3r 286 6,78825
6svXs 287 6,54344
7mKHp 279 8,86758
7t6mt 286 7,63407
830sb 203 7,05101
8dcIj 287 7,11092
8jGGC 256 9,27773
8qXAZ 297 8,57992
dJBL 302 5,24638
lylS 228 6,30284
nf4L 297 6,70509
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_38032
5TEy4
 7 39,8% 198 2.119E-68
2 phalp2_25173
1Q6iX
 8 44,8% 174 3.221E-66
3 phalp2_11194
66qoq
 192 32,4% 179 1.420E-47
4 phalp2_36734
6wFxi
 48 37,0% 186 3.585E-39
5 phalp2_35170
5Pl7W
 37 29,8% 261 2.321E-38
6 phalp2_36408
PWlr
 18 29,6% 209 1.156E-28
7 phalp2_5201
4158F
 12 29,7% 178 1.858E-27
8 phalp2_35713
3TDiN
 29 33,3% 189 1.180E-26
9 phalp2_10426
21zbN
 33 32,4% 179 4.732E-25
10 phalp2_30977
1gyND
 11 29,4% 190 7.497E-24

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 1KNyb (260 AA)
Member sequence: 6dgs7 (287 AA)
1 260 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1KNyb) rather than this protein.
PDB ID
1KNyb
Method AlphaFoldv2
Resolution 88.20
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50