Protein

Protein accession
6cY7t [EnVhog]
Representative
1gJBd
Source
EnVhog (cluster: phalp2_10294)
Protein name
6cY7t
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSNSPLVVYTKISPNRNSPRNRPIRKITIHHMAGNLSIERCGEVFAPVSRQASSNYGIGTDGRIGMYVEEKDRAWTSSSPENDHQAITIEVANDEIGGQWHVSDKAMVSLINLCADICKRNGIKKLNYTGDKSGNLTMHCWFANTLCPGPYLKSKFPYIAEEVNKRLGQSSTNQTGTQAADLGSLSEEAIISKIGPLFTADQKKTGVLASVSMAQFILESAYGKSELAKNANNCFGMKTRLSGNTWSGSTWDGSVYIKETKEFTNGTYTTITANFRKYSSIEDSIADHSAYLLGAMNGSKKRYEGLKGEPNYKKAAQLIKDGGYATSPTYVENLCKVIEKWNLTKYECKQTESESSDMAFPNVPFAVTVLVNDLNYRSEPSMKGAVKGQTGKGIFTIVKVSDGWGKLKSGVGWIWLGNSDYCTFEKPAAPKSIWDTNGPWRIEGATGTDKTALKEVCEKYGLKVTSI
Physico‐chemical
properties
protein length:467 AA
molecular weight:51261,4 Da
isoelectric point:8,91
hydropathy:-0,47
Representative Protein Details
Accession
1gJBd
Protein name
1gJBd
Sequence length
535 AA
Molecular weight
58276,46800 Da
Isoelectric point
7,50698
Sequence
MARICLDPGHYSNSYNAGAVKGYYESAIVWKLTMYEKEFLEKWGHVVVLTRTNINDNPSLTVRGQKAKGCAAFVSNHTNACATPSITRAVGIYMTDKLGTDIDDKSKELAIKMAQTVDKSMGNIGHQVFSKLSDKDRDGNGLKDDNYYGVLHSAFATGVPGIIMEHGFHTNAGVCNWLMNDKNLRKLAEDCAKCIAAFVGDDVEINEKSLPASNFKSQSREEILEVVGPLLTEDQKASGILASVTGAQLILESDGLQSELAQNANNCFGMKGNLSGNTWQGSVWDGKLYSKKTSEWDGTKYIEVVADFRAYPDIQHSMADHSAYLANAMNGKKKRYEGLVGCTDHKKALQIIKDGGYATSPDYVQKLLNVIDKYDLKRFDCPMEESTPATGATTYPATPFLVQVLIDDLNYRSLPSMKGEVKGCTGKGKFTITEVSNGWGKLKSGVGWIWLGNSTYCTVLDSVKEEPKVPFVVAVDILNLNIRTGPGTGYATTGTTTGIGKFTIVEVKEGKGSKAGWGRLKSGAGWISLDYTTRV
Other Proteins in cluster: phalp2_10294
Total (incl. this protein): 19 Avg length: 504,1 Avg pI: 7,15
Protein ID Length (AA) pI
1gJBd 535 7,50698
13q9E 529 5,94612
13woX 529 8,82322
1Ioxu 527 5,33743
1jEhy 560 6,06247
2mhnV 519 5,88223
3PC7x 519 5,50113
3Q2iS 527 5,28605
3nSxp 450 9,17541
3sjFa 508 8,69061
3uMPT 529 8,76591
3vPOJ 460 5,55882
63Jt0 519 5,24314
6ZNoO 508 8,68694
85xQ2 435 8,15217
K7Bn 456 7,88734
occ7 471 5,69046
zlpI 529 8,68326
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_35371
18KG
 17 43,4% 357 6.483E-108
2 phalp2_37075
13rC8
 2 45,1% 332 7.326E-104
3 phalp2_2869
netU
 143 30,3% 372 4.666E-82
4 phalp2_39497
5jS1N
 14 26,4% 544 4.501E-55
5 phalp2_18634
8Scy
 22 30,2% 413 8.244E-55
6 phalp2_26355
1k2gh
 2 27,6% 362 9.258E-54

Domains

Domains
Ami3
GLUCO
Unannotated
Unannotated
Representative sequence (used for alignment): 1gJBd (535 AA)
Member sequence: 6cY7t (467 AA)
1 535 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520, PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6cY7t
Method AlphaFoldv2
Resolution 87.43
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1gJBd) rather than this protein.
PDB ID
1gJBd
Method AlphaFoldv2
Resolution 89.43
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50