Protein

Protein accession
6YMDT [EnVhog]
Representative
6W6ka
Source
EnVhog (cluster: phalp2_30683)
Protein name
6YMDT
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MVNTELAISFMAGLEGNVSYSMARREGPSSYDCSSAIYYALRAGGASPAAWTVNTETEHDWLIVNGYYLLAENEDWDMQRGDVIIWGPKGQSLGAGGHTMLALDADNVIHCTYAANGVTRNDYNQLYGWNAGTMGGPYVYVYRQNGTTPQKSESVQQGTPPEAAAGTLEQLAGEVMAGKYGSGDERKAALGSKYAAVQTIVNERLEAINASTSHNRLADEVLAGHLGNGDERRANLGTYYNAIQNIVNSR
Physico‐chemical
properties
protein length:250 AA
molecular weight:26916,4 Da
isoelectric point:4,92
hydropathy:-0,41
Representative Protein Details
Accession
6W6ka
Protein name
6W6ka
Sequence length
244 AA
Molecular weight
26640,78210 Da
Isoelectric point
9,28314
Sequence
MSFNLQKAIDFMYGLKSRGVTYSMLGKRNGSDGTADCSGAIYTALLQAGLSDAGWILNTDSMHKWLRNNGYKKIATNQEWPMQKHDVIIFGPEGASRGAAGHVVYALDGTNVIHCNYGANGVSVNNENQMPYDMGWTVYRFPGAGNPNPTTKPSNGAVIDDVIRGKYGSGLERRKNLKAAGYDPDKVQKDVNERLLGGVPDKQVDKIAREVLQGKWGNGDERTKRLKAAGHDPVKVQTIVNQLV
Other Proteins in cluster: phalp2_30683
Total (incl. this protein): 7 Avg length: 249,3 Avg pI: 6,16
Protein ID Length (AA) pI
6W6ka 244 9,28314
3c8eP 250 4,86584
5RP6y 250 5,10917
6Z9ER 250 4,77188
7gzsw 251 9,24414
8pMt0 250 4,93149
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_9275
76k47
 345 43,9% 157 3.516E-58
2 phalp2_632
1csV3
 60 48,0% 154 1.519E-56
3 phalp2_6360
7uUam
 41 35,6% 216 8.370E-43
4 phalp2_20154
415G3
 53 31,4% 264 1.509E-39
5 phalp2_20987
7y6FJ
 38 33,8% 177 4.389E-30
6 phalp2_37490
3aozl
 1 33,8% 192 4.134E-19
7 phalp2_30701
76YNm
 80 26,2% 221 2.058E-15

Domains

Domains
Ami5
CW_7
CW_7
Representative sequence (used for alignment): 6W6ka (244 AA)
Member sequence: 6YMDT (250 AA)
1 244 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05382, PF08230

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6W6ka) rather than this protein.
PDB ID
6W6ka
Method AlphaFoldv2
Resolution 84.89
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50