Protein

Protein accession
6VRlB [EnVhog]
Representative
1pCMB
Source
EnVhog (cluster: phalp2_8523)
Protein name
6VRlB
Lysin probability
98%
PhaLP type
endolysin
Probability: 94% (predicted by ML model)
Protein sequence
LKEIPGTKHNPAILDFFRDAGHPEVKDDETAWCAAFANAMLVRRGYAGTGSLAARSFLNLGEPLDRPVPGCIVVLTRGGSSWQGHVGFFVRWDGGSLILLGGNQRNAVNETPYLKSAVLGYRWPTKKLPMKKPMLEKHPDVLPAKNVPPPDIEKPDERPEDTEQLPWYKRLWVKLTGAGLGIGGLLGGGSFTVDFDFKLVLALCVLVLVCAAVYWFMWGRKE
Physico‐chemical
properties
protein length:222 AA
molecular weight:24483,1 Da
isoelectric point:8,86
hydropathy:-0,11
Representative Protein Details
Accession
1pCMB
Protein name
1pCMB
Sequence length
247 AA
Molecular weight
26912,22290 Da
Isoelectric point
6,97263
Sequence
MNTPPKWFVLAQAELGVAETEGPKHTARVLEYFRLAGHPEISDDETAWCAAFACAMLELADVRSPRTLRARDFLDWGVAVTQARQGDVVVFRRGTNPKQGHVGFFDRWSPDGRKILVRGGNQSNAVRDQWYSVDDLLGFRRPMDEVHAPAPQAATTPAVVKTSRKWSLSEQWSRIQIALGLGTGGAVVGDQANVLPDIIGLVKKFATDHAGLLIVGGVVAGVLVSETIKQLVKQDVSDGRYTPSGEQ
Other Proteins in cluster: phalp2_8523
Total (incl. this protein): 7 Avg length: 227,7 Avg pI: 8,07
Protein ID Length (AA) pI
1pCMB 247 6,97263
11jFs 243 7,68409
1XLwo 256 6,12891
1jYRP 207 9,23344
2fuMv 213 9,09663
4v1ou 206 8,50024
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_37918
4UqBP
 157 46,1% 154 1.240E-53
2 phalp2_17303
4eTLb
 16 48,4% 157 6.540E-51
3 phalp2_21703
3iJm5
 22 33,9% 215 1.837E-48
4 phalp2_32166
6PqA1
 486 40,5% 170 2.512E-48
5 phalp2_33123
4M8WF
 3 38,6% 168 2.748E-46
6 phalp2_27135
2Vze6
 4 36,6% 161 2.291E-39
7 phalp2_38999
8dFXu
 7 33,1% 205 3.130E-39
8 phalp2_37558
3GCv7
 1 36,5% 238 3.365E-37
9 phalp2_9646
1LfXa
 7 25,4% 165 9.597E-26
10 phalp2_20540
4muWr
 288 28,0% 175 1.136E-20

Domains

Domains
CHAP
Disordered region
Representative sequence (used for alignment): 1pCMB (247 AA)
Member sequence: 6VRlB (222 AA)
1 247 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6VRlB
Method AlphaFoldv2
Resolution 78.59
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1pCMB) rather than this protein.
PDB ID
1pCMB
Method AlphaFoldv2
Resolution 71.97
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50