Protein

Protein accession
6VDpS [EnVhog]
Representative
4wbHB
Source
EnVhog (cluster: phalp2_39336)
Protein name
6VDpS
Lysin probability
63%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNIPQLKQLLQNNITYGENGRPQAKHGVLSLVSLVMPDTSKVWGVDISHWNLPGVDLKRMVDLYGLKFVIIKGCDGALNSKYYLDHVASAKAAGIPWGIYNWLYPASKVNMDAQVNAWYARYNADVPPMGIFIDAETTYYGGVLANPSATDLRSAHNKWMTKAGKEATTYTGKYFADTYLIGFDFSREPLWIANYGVNSPALPKGATTYHLWQFTSTLDGKQLDPNGNYELDGNYYNGTLAQFQAEYGYIVTPPPTEEKMRYFTIAGTPTIPATVKMNIRSTVGITTTNDVGDLFAGDKIEVSETVNVSATDKWGKLSKIIRANGAEFPLPAPVCYVSLNTANTVETFPQLKTITDVNIKLAAGSVVTTVYSDGTSESRTA
Physico‐chemical
properties
protein length:381 AA
molecular weight:41813,8 Da
isoelectric point:6,23
hydropathy:-0,21
Representative Protein Details
Accession
4wbHB
Protein name
4wbHB
Sequence length
344 AA
Molecular weight
38817,40390 Da
Isoelectric point
5,88195
Sequence
MTENFSGQFLLGERPSFLARLISQSIIVPDDAETFADVSFYQAGMDWSRYPHRAAILRVGQNVWKDTEFEYNYSECVRRKIIVGGYWFYDDRVSPQAQADVILNAMAEKKFAMEFFIDFERVYGGPFVGLKYVKQLIELIENKIQCKAIGIYTGYYFWLTNTANDTAYYPFFAPRPLWLAWYSSAVNVKVPPPWTTWTHWQYGTPTVDWGQPTREIDANRHNGTRAEFEARYGIITVPPTTGGNMLKGTLKSTTTSLKIRSGPSTAYPQIDGIYTGDTVYGVLDAATNWLHVSKIVRANGATQPIDGWCSAAYLDLVDAPETGEITVTATLKSDGTVVGTWTRK
Other Proteins in cluster: phalp2_39336
Total (incl. this protein): 21 Avg length: 362,5 Avg pI: 5,52
Protein ID Length (AA) pI
4wbHB 344 5,88195
11fm8 378 6,25231
1KHBU 378 5,41661
1Kvxc 410 5,75116
1ZumR 334 4,89051
1Zvfm 405 6,40896
2A9Zq 373 4,98958
2AhjI 351 5,86569
2t4l6 385 6,01472
37Vwb 364 5,03880
3fgTs 344 6,44738
3nxIR 383 4,67696
4Adw9 329 4,67310
4jOx7 302 4,94394
5IQFx 382 6,61227
5ku7D 370 5,12457
5tEp0 373 4,89693
6KZEY 347 4,68481
6U2v8 287 5,24365
7MHK 392 5,93379
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10418
1ZuZp
 8 38,1% 236 9.649E-89
2 phalp2_5144
1Zty9
 17 31,5% 263 1.025E-80
3 phalp2_5862
5yfd0
 6 28,0% 296 2.601E-49
4 phalp2_6607
1p0KW
 6 23,4% 320 3.385E-40
5 phalp2_32454
14CKX
 28 25,8% 309 1.571E-37
6 phalp2_14402
4w7mj
 98 23,9% 251 2.899E-37
7 phalp2_9921
2NATP
 5 27,3% 292 1.514E-33
8 phalp2_17115
2A8rZ
 22 26,5% 252 5.124E-33
9 phalp2_32062
5JN4Y
 6 26,5% 267 3.185E-32
10 phalp2_1137
5J3v
 11 25,2% 301 1.873E-29

Domains

Domains
Disordered region
GH25
SH3_3
Representative sequence (used for alignment): 4wbHB (344 AA)
Member sequence: 6VDpS (381 AA)
1 344 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF08239

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4wbHB) rather than this protein.
PDB ID
4wbHB
Method AlphaFoldv2
Resolution 84.02
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50