Protein

Protein accession
6VDCP [EnVhog]
Representative
15vGm
Source
EnVhog (cluster: phalp2_4027)
Protein name
6VDCP
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAWRNCAASVVLVNEVDARWPNRDKASDGTIGDAAHASRDSDHNAWVIVNGVGVVRARDIDEDLDGQKADTGKDAGILFEHLLKLAKAGDPRLNGGGYLIYESRIYSEKGNWVSRPYNGPNAHKKHIHISFSRNRSGFDSTAPWGIYPTATQKPKPPTGALMSLSSEEQDELLRLARSNELRLIQIQKILLGDDPDGKGDTQERQLASLKRLEIDVDKLLAEG
Physico‐chemical
properties
protein length:223 AA
molecular weight:24563,2 Da
isoelectric point:6,08
hydropathy:-0,61
Representative Protein Details
Accession
15vGm
Protein name
15vGm
Sequence length
239 AA
Molecular weight
26270,76790 Da
Isoelectric point
4,85288
Sequence
MAWRNCSASITLANELNARWPKRDHESDGTIGDAAHASRKSDHNPWVVVGGIGVVRARDVDEDLDGNKGNGYLDAKVLFEHLLALARAGDDRLNGGGYLIYEGMIYSEKNNWQGKKYTGPNAHAHHLHISFSLNQAGYDSTAPWGIFPVSGAPEQPTTPEGPFMALTDKEQQELLLKTRANDLRLQQIQDILLGDNPKLGDVAERQLASLKRIEKELDELQDDVEDLQDDAADSAPPPA
Other Proteins in cluster: phalp2_4027
Total (incl. this protein): 7 Avg length: 229,4 Avg pI: 6,43
Protein ID Length (AA) pI
15vGm 239 4,85288
1EcR3 226 9,24472
1uKwM 209 5,36062
4G3tp 249 5,26149
5n9QJ 220 9,09715
8sJ7A 240 5,13901
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13481
4MwHx
 44 46,9% 149 1.825E-45
2 phalp2_28543
42Uly
 5 40,7% 238 3.413E-45
3 phalp2_30242
4eMiX
 353 45,0% 162 6.974E-43
4 phalp2_13732
6FTky
 17 37,8% 161 1.537E-38
5 phalp2_32120
6x0wl
 2 37,9% 145 3.538E-32
6 phalp2_19633
4jViv
 6 38,8% 157 1.675E-31
7 phalp2_8424
SmEG
 4 37,3% 158 6.968E-30
8 phalp2_20923
78NuD
 2 35,5% 163 4.486E-29
9 phalp2_19235
42vyU
 4 37,5% 168 6.117E-29
10 phalp2_39312
4kyeu
 9 31,6% 202 8.342E-29

Domains

Domains
Unannotated
Unannotated
Disordered region
Representative sequence (used for alignment): 15vGm (239 AA)
Member sequence: 6VDCP (223 AA)
1 239 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6VDCP
Method AlphaFoldv2
Resolution 82.69
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (15vGm) rather than this protein.
PDB ID
15vGm
Method AlphaFoldv2
Resolution 75.87
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50