Protein

Protein accession
6RxdZ [EnVhog]
Representative
82pcH
Source
EnVhog (cluster: phalp2_1609)
Protein name
6RxdZ
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MATWGTPIEHGRFTAPFGEQRPTGTHLGTDIGPPSPGQTGVPVYAMGPGTVNRTGYTDIRGHWVLVLHDDGSYSRYQHLAAAPFVAAGQRVQAGTAVGICGATGRATGIHLHLEAYPAGPNPGESQSGAINPESWASARGVNLRALGALPTPTTPVPTEPDPTTQEDPMFVAFNKGGGPAVLVYPSGKWALVTDGADAAAMKTAGIPSIDVSANTFTNLTPPAAALSAA
Physico‐chemical
properties
protein length:229 AA
molecular weight:23370,8 Da
isoelectric point:5,92
hydropathy:-0,15
Representative Protein Details
Accession
82pcH
Protein name
82pcH
Sequence length
200 AA
Molecular weight
20919,57440 Da
Isoelectric point
9,93034
Sequence
MTTYSSPVPAGSRPTSGFRTKARPTHAGDDFAPPKPGQKNVPIHAVADGTVLSVGVNILAGHSGRAVLIDHGTHKDKYGSDHMKSYSGHLESYSVRAGEKVYAGQVIGIMGETGNATGIHLHLGVLCNGKFIDPSDWLGRKGITIGRTAPAKPKASTYTVKAGDTLSAIALKHGTTSAKLAKTNGISNPNLIRVGQKIKY
Other Proteins in cluster: phalp2_1609
Total (incl. this protein): 10 Avg length: 212,0 Avg pI: 9,14
Protein ID Length (AA) pI
82pcH 200 9,93034
5IsEK 172 4,89562
75El 206 9,99803
7cXPZ 237 10,22760
A0A3G2KCW1 221 10,05592
A0A3G2KD90 206 10,13225
A0A3G2KJ81 206 10,13225
A0AA50EBH6 221 9,92815
A0AA96SFM3 222 10,18041
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_30474
4WlHp
 1 29,1% 216 6.354E-22
2 phalp2_35838
4GGll
 4 36,1% 141 2.202E-21
3 phalp2_39908
1iVNq
 39 31,5% 171 5.589E-21
4 phalp2_1375
1fRbd
 2 35,7% 151 1.243E-19
5 phalp2_30590
66hsO
 9 38,8% 139 1.694E-19
6 phalp2_12
4LMlP
 4 33,8% 139 1.694E-19
7 phalp2_35274
6TFzn
 1 32,8% 140 3.148E-19
8 phalp2_24690
60yb2
 39 30,6% 137 3.148E-19
9 phalp2_20604
4H0aV
 4 35,5% 135 1.086E-18
10 phalp2_27075
2pChT
 5 37,0% 135 2.016E-18

Domains

Domains
PET_M23
LysM
Representative sequence (used for alignment): 82pcH (200 AA)
Member sequence: 6RxdZ (229 AA)
1 200 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476, PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6RxdZ
Method AlphaFoldv2
Resolution 79.59
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (82pcH) rather than this protein.
PDB ID
82pcH
Method AlphaFoldv2
Resolution 93.47
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50