Protein

Protein accession
6PDTP [EnVhog]
Representative
1rtno
Source
EnVhog (cluster: phalp2_38506)
Protein name
6PDTP
Lysin probability
99%
PhaLP type
endolysin
Probability: 88% (predicted by ML model)
Protein sequence
MSKTTDNEAFALHAQTTLKARGHYLGDIDGWAGPITRKAFDAALPPPATTKPPAPTGNAARLYAQALRDKGLKETSGSASTPRIRRAIMEAASWLDPDDSVTAWCGCIMGLWCSEVGITPPAEYFRAANWLNIGKPVDISKAKQGDIVVLSRSGGNHVALYHSHSATHITLLGGNQKNAVNLSTYSRDSLRGIRAV
Physico‐chemical
properties
protein length:196 AA
molecular weight:20950,5 Da
isoelectric point:9,37
hydropathy:-0,28
Representative Protein Details
Accession
1rtno
Protein name
1rtno
Sequence length
200 AA
Molecular weight
21135,55330 Da
Isoelectric point
7,83969
Sequence
MSKNIANEAFARRVQSDLHGRGLYTGTVDGWAGPQTIEAWGLLVGDGFTVPRPGGTGSTDQSAQLYAHALKDDGLRETAGKGSTPRIREAILGAASWLDPDDSATAWCGCIMGLWVKEIGLTPPVAHYRAASWLDIGTEVPLASARPGDIVVISRTGGNHVALYLAHDTGTITLYGGNQSNAVNIAKFPRSSLRGVRRLA
Other Proteins in cluster: phalp2_38506
Total (incl. this protein): 9 Avg length: 166,4 Avg pI: 7,78
Protein ID Length (AA) pI
1rtno 200 7,83969
1HMSi 138 9,83557
1KGxV 187 6,90016
2adIQ 140 6,81058
2ahlh 144 9,29887
36zEj 140 5,31867
3T9NU 218 5,36028
94Mr 135 9,29894
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_34973
4FMbb
 48 52,1% 140 3.584E-48
2 phalp2_19771
7LzfF
 669 36,6% 139 3.613E-45
3 phalp2_31967
4Vkzp
 33 28,9% 190 1.571E-40
4 phalp2_37918
4UqBP
 157 39,5% 139 1.033E-39
5 phalp2_35973
5kZXR
 1764 40,6% 133 1.741E-38
6 phalp2_32166
6PqA1
 486 36,0% 147 8.358E-38
7 phalp2_28323
16UXy
 9 31,8% 198 1.565E-37
8 phalp2_21703
3iJm5
 22 34,7% 138 1.015E-33
9 phalp2_35078
59R52
 32 30,8% 133 1.900E-33
10 phalp2_21029
9AcO
 22 26,6% 218 6.650E-33

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 1rtno (200 AA)
Member sequence: 6PDTP (196 AA)
1 200 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6PDTP
Method AlphaFoldv2
Resolution 90.73
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1rtno) rather than this protein.
PDB ID
1rtno
Method AlphaFoldv2
Resolution 87.34
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50