Protein

Protein accession
6PCed [EnVhog]
Representative
8j0Fu
Source
EnVhog (cluster: phalp2_31291)
Protein name
6PCed
Lysin probability
90%
PhaLP type
endolysin
Probability: 74% (predicted by ML model)
Protein sequence
MPGVTRITDPNSGHNCWGTSSSNVGSPNVIVNGLPVTRQGDPWEPCPAHCPNTSDHVSDVVTGDPTVLVNGKPIARIGDILGCSSIVIGGSSNVMSCNVNHSWPPPQSEEEKDKADLEDEGQMQGLRIWPPLKQGATPTEAQIKQSKANGVDPDAPPATPAQKDDVPPVQTTPPPPDCGGLVPPFTSATRLSQNFTLGDLTIRTPAGSHPLRAQHGLTEAEIVCNLKQLCDNVLEPIRGMGYEFVVNSAFRNVQGKNSQHEYGQAADLRFNGKSNQEVFEIAQRIKNSGLPFGQMILEYPSRLPWIHVSFPERTKGSPFKVSTMDKNYKLTTGLQLYT
Physico‐chemical
properties
protein length:338 AA
molecular weight:36503,6 Da
isoelectric point:5,76
hydropathy:-0,51
Representative Protein Details
Accession
8j0Fu
Protein name
8j0Fu
Sequence length
358 AA
Molecular weight
38897,85220 Da
Isoelectric point
4,88602
Sequence
MPAASILGKNSTPDLCGAPPRTSSTFSPNVFIENEPVVRLGDAWVPHACPLSPPHVGYTASASPTVFINGVGCARVGDEISCSSTIAEGSSTVFIENESSIIQGVTILNDQLDRKNISRLADGYREWSGTTVVNVVQGTGLEIADDEYENADGQSDLYPPAPQTAPPQPISPSDIETTAPDTGPTSTGTPITDCSAITEPIDYNWFLSPHFQLKQLSISAVFPHTIKAQRGLTIPEIVCNLKGLCENMLEPIWASYPGFRINSAFRTSDGSTSHHHLGWAADLQWASFSYNDYFTLATWIQNNFSFTQLLLEHSSSGTPWIHISYNQSDIRNPGDPRRVMTMYQGRFTSGLHKIAGYA
Other Proteins in cluster: phalp2_31291
Total (incl. this protein): 60 Avg length: 287,7 Avg pI: 5,79
Protein ID Length (AA) pI
8j0Fu 358 4,88602
13JR7 324 5,36346
1YPFV 259 5,36824
1Ytz1 259 5,36824
1ozQ0 264 5,76191
1r3fl 339 6,00506
1sl9h 357 6,04985
20tb3 259 5,17686
24Ij 259 5,80425
25DrB 260 5,17686
26Nfs 359 4,99350
27eJA 343 6,30938
2TVMk 349 5,51448
2VPFN 336 6,30875
2azGM 265 6,89113
2fRsx 254 4,42210
35YwF 264 5,91418
3P1kt 359 4,74977
3Qlsx 259 5,93504
3SPch 256 5,31509
3zPfd 264 5,42422
41yEB 261 5,61458
4Bc0G 256 6,06133
4GG0O 260 5,15305
4KLeo 257 5,51392
4N3Bp 272 5,16004
4Npzf 258 5,07398
4PxYh 257 5,76867
4Py7d 256 6,81445
4XT1z 334 6,19076
4ckZF 245 7,68397
4ftCe 257 5,82125
4gJa4 327 4,94763
4grHK 262 5,07808
4vYBB 274 5,75832
4w1S7 257 4,81986
4w4Ol 257 4,83566
4wV3i 335 6,24333
5CiPn 334 6,75278
5Iel9 261 5,64772
5JDiA 258 6,88811
5Jzue 271 6,58590
6DWMi 335 6,15819
6DcGp 261 5,28292
6HT1c 265 5,13827
6K85p 265 6,88902
6Kmrf 345 5,77697
6LHem 263 5,55547
6Ncu4 263 5,63464
6W7xv 321 8,39715
7E5tj 266 5,17680
7F880 189 6,94967
83B0h 321 9,24813
9bNU 273 5,59662
XApX 260 5,18419
e7sN 335 5,57257
ea7B 258 5,92577
kINx 352 5,08092
tDJ6 359 4,80371
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_4065
1hHiS
 54 31,2% 368 1.574E-71
2 phalp2_1695
2aHBP
 47 32,1% 264 6.627E-55
3 phalp2_30986
1idFS
 1 26,9% 378 1.627E-35
4 phalp2_2316
4Jcsj
 9 28,5% 312 9.422E-28

Domains

Domains
PAAR_motif
Unannotated
Representative sequence (used for alignment): 8j0Fu (358 AA)
Member sequence: 6PCed (338 AA)
1 358 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05488

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6PCed
Method AlphaFoldv2
Resolution 75.51
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (8j0Fu) rather than this protein.
PDB ID
8j0Fu
Method AlphaFoldv2
Resolution 71.84
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50