Protein

Protein accession
1nYVD [EnVhog]
Representative
1nYVD (this protein)
Source
EnVhog (cluster: phalp2_32524)
Protein name
1nYVD
Lysin probability
55%
PhaLP type
endolysin
Probability: 89% (predicted by ML model)
Protein sequence
IILCLCRDTLPVTAKQPDKPDILLNASLYTKDHNGIGTFYEAGKLTQDNGSGYGVGNIVEALEDIKFGKPFDGTAWYDYLTGYYGLIQQGKKIDPPWNDAYVFGKKNKRIAIGKDKQGRICVATASGMDIKEFRDYGYSNGLTEMVNLDGGGSVSLYWQGQQISKSSRTPYNAIAIWLDKEDDKPMAGYAQVRCTRKTLVYDANGRVQNGRHIASGDICQLSLDIDGRTVQAAIQYPAGNTKRWAYVKDLANFRAV
Physico‐chemical
properties
protein length:256 AA
molecular weight:28332,7 Da
isoelectric point:8,65
hydropathy:-0,45
Other Proteins in cluster: phalp2_32524
Total (incl. this protein): 6 Avg length: 270,8 Avg pI: 8,92
Protein ID Length (AA) pI
3nOF3 274 9,37681
60KKq 277 9,33227
86g7G 272 9,14363
8ix31 273 8,95029
8oAZH 273 8,07210
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25492
3bTZG
 7 34,6% 182 1.907E-28
2 phalp2_19326
8qfPb
 1 25,9% 162 3.371E-06
3 phalp2_27053
2db8k
 2 25,1% 195 8.022E-05
4 phalp2_12159
6kpQG
 6 22,2% 225 4.482E-04

Domains

Domains
NAGPA
Unannotated
Protein sequence: 1nYVD
1 256
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF09992

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1nYVD
Method AlphaFoldv2
Resolution 86.88
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50