Protein

Protein accession
1lyD [EnVhog]
Representative
1lyD (this protein)
Source
EnVhog (cluster: phalp2_2764)
Protein name
1lyD
Lysin probability
98%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MSSKRNLGIEGRNLIKSFEGYRNTAYLCQANVWTIGFGHTAGVKAGQVITLAQAETYLDVDVASAVNAVNSNVNSDIDINQNQFDSLVSFTFNCGVGALRSSTLLKYVNANDMNKAANEFLAWNKVTQNGVKVVSNGLVRRREAERLLFLKPVVKQGFVKTDSGEWNYYKEDGSKAVGWYEVENKHYYFEPNGNMKIGWVKYKENWYYLNSDGYMVVSWYEVDYNWYYFNSKGEMEVGWVNVDNEWYYLKDTGVAVMKEWRFLGEEWYYFNIDGKMVVGCEKIGNKTYVFGEDGRMLKGDITLKTDDKGAVVAIMQ
Physico‐chemical
properties
protein length:316 AA
molecular weight:36173,3 Da
isoelectric point:5,65
hydropathy:-0,40
Other Proteins in cluster: phalp2_2764
Total (incl. this protein): 3 Avg length: 261,7 Avg pI: 8,04
Protein ID Length (AA) pI
4KBAE 254 9,34929
5i0GW 215 9,11423
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10187
xiY3
 70 41,1% 231 6.801E-54
2 phalp2_6725
21J6O
 3 21,2% 385 3.243E-18

Domains

Domains
GH24
Choline_bind_3
Protein sequence: 1lyD
1 316
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959, PF19127

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1lyD
Method AlphaFoldv2
Resolution 95.06
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50