Protein

Protein accession
13rdU [EnVhog]
Representative
4kbYu
Source
EnVhog (cluster: phalp2_3502)
Protein name
13rdU
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAGRKITVKGLMLHSVGCPQPRASVFINSWNSPSYSNACVHGFIDGNDGTVYQTLPWNHRGWHCGSGSKGSGNNTHIGVEMCEPACIKYTGGSSFTCSDKATAKAVAKRTYEAAVELFAMLCKQYNLNPTADGVIISHREGHSRGIASNHGDPEHLWNGLGMGYTMDGFRKAVKAAIDGSGSSGGGTGTSGLQASALKNLSEADVIAKVGPLFTADQKTSGILASVSLAQFILESGYGKSELAQNANNCFGMKKSLSGNTWGGSAWDGTSIYTKKTQEYENGAYVTVSADFRKYPSVEKSIADHSAYLLGAKNGAKLRYAGLKGCTDYKKAVQIIKDGGYATSPTYVENLCSIIEKWKLTQYDVANAGTAEVWYRVRKTWADAASQKGAFHNLANAKKCADENAGYSVFDESGKNLYTGKQTAFQPYLVKVSVSDLRIRKGPGTDNAKTGKYTGTGVFTIVEEADGPGASRWGLLKAYQKNRDGWISLDYAQRV
Physico‐chemical
properties
protein length:494 AA
molecular weight:52922,8 Da
isoelectric point:9,09
hydropathy:-0,40
Representative Protein Details
Accession
4kbYu
Protein name
4kbYu
Sequence length
490 AA
Molecular weight
54611,79970 Da
Isoelectric point
8,52725
Sequence
MKIQTQYLTTNNSYDTNTPEAIVVHNTDNFKSTADAKAHAEGLKAGYMSGMSWHIVTDDKAAYQCLPYNRGAWHVGVNYGGKLFGKINNRNSICVEMCVNAGYDYEKAFQNTVDVVKQLMKMHGIPADRVYQHYDICAKNCPSQIRAKGDWNRFKQMIGASGTDYNPQTEIQVDQYYRVRTSWENSASQLGAYQILKNAIDHCPAGYTVFDWNGKPVYTNEAKGTQAVSMNGMAEAEKIKFMAPLYQKVAKETGLLASVGLAQAWLESGGGTTDLAQNANNMHGMKCSLSGNTWPGSTWDGVSKYNKRTQEQDKNGNPYYVYADFRKYPCMEDSVADRAAYYLGAMNGSVRRYPGIENIKTAEGQIRAIKAGGYATDINYVSKLMNIVNRFNLTQYDVPADPQPTPEPTPTPEPSVIYRVQVGAYEKRGRATDCASTTEKRSGYKCFTEKATDGLYHVYCGSFEDKANAWQRKDALEKIAIPAIIKEVAK
Other Proteins in cluster: phalp2_3502
Total (incl. this protein): 91 Avg length: 496,8 Avg pI: 8,57
Protein ID Length (AA) pI
4kbYu 490 8,52725
13CXa 508 9,23479
13Dkt 511 8,12020
13t5n 497 9,14196
197sk 498 9,06408
1FVgF 497 9,17039
1FzDt 498 8,43841
1Hspc 496 9,07749
1cMOJ 517 5,81772
1cMhE 385 8,11130
1cunL 496 9,13590
1jG06 518 8,95068
1n0Mn 514 9,12919
1p0Fa 501 6,80734
21C1m 516 8,98852
21PFd 499 9,23318
21PdU 497 9,12365
21gTk 516 9,17954
21jIb 497 9,27134
21kH0 496 9,26928
21nFc 508 6,46858
21rqg 522 8,74954
233Kr 667 9,26735
23AmB 518 6,11885
23LQH 510 8,56561
23OQp 504 4,56522
23bgC 530 8,60480
23ddG 516 9,04132
23du2 303 8,62653
24BD5 418 9,12107
24CpB 508 6,63711
24EKb 497 9,20565
24nvv 516 9,09257
24s7w 541 9,16355
2Vb6F 470 9,23124
2VcXq 502 7,88863
2ViRJ 520 6,29824
2VkcD 497 9,31112
2Vknm 517 8,85423
2lSDH 497 9,24672
38N5s 497 9,25220
3PDWB 318 9,65158
3Q2jK 498 8,55387
3TMVW 513 8,95519
3TPa5 513 8,72749
3VFWj 519 6,72612
3WMtF 491 8,65296
3ZUjj 492 9,17567
3dNOv 518 5,90741
3fLC2 497 9,33446
3h2Wh 495 6,29147
3iYH5 497 9,06259
3ibsX 450 8,88279
3kS70 508 9,16252
3kjyn 507 9,03571
3oWyH 507 9,08748
3rvvS 505 8,06159
3ssip 480 9,34593
3v5x3 349 7,53909
3ypP2 504 8,90162
419uK 516 8,89150
41fRC 518 8,73696
41gNp 515 8,94758
41jG1 517 6,44755
4MitD 490 9,29378
4xFs6 490 9,32266
4ycw0 458 9,05641
4yggO 447 8,81085
5K6sM 540 9,05679
5LHkn 500 9,06124
5LW7H 479 9,18425
5SL9E 500 9,00019
5VcLf 444 9,09689
5XE5v 551 8,78822
60Mng 475 9,35831
67lI 565 8,24423
6HN4j 541 9,25555
6f5zd 483 9,46797
72zqC 497 9,30545
75L9 507 9,08677
7DPQT 573 6,27101
7Jw4U 519 6,06582
7tQPc 490 9,50968
7uRGh 482 9,44032
7uox7 504 9,02740
7wHY7 504 8,95867
83IH 495 8,74812
83uSL 469 9,40105
8t9oS 499 8,92605
gpkq 485 7,44252
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_4202
24Fe2
 14 46,6% 407 2.194E-146
2 phalp2_35371
18KG
 17 48,9% 386 3.263E-141
3 phalp2_781
23EGH
 9 37,3% 485 5.874E-121
4 phalp2_1523
24Dzx
 9 31,8% 505 5.505E-115
5 phalp2_27134
2Vo7e
 4 32,2% 475 6.446E-111
6 phalp2_15411
21scl
 1 33,6% 582 3.397E-88
7 phalp2_30597
6byCR
 1 26,9% 501 1.686E-85
8 phalp2_2693
76oFz
 7 32,8% 493 6.623E-79

Domains

Domains
Ami2
Unannotated
GLUCO
SPOR
Representative sequence (used for alignment): 4kbYu (490 AA)
Member sequence: 13rdU (494 AA)
1 490 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF01832, PF05036

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4kbYu) rather than this protein.
PDB ID
4kbYu
Method AlphaFoldv2
Resolution 89.00
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50