Protein

Protein accession
6D7Pi [EnVhog]
Representative
1ddn4
Source
EnVhog (cluster: phalp2_29691)
Protein name
6D7Pi
Lysin probability
97%
PhaLP type
endolysin
Probability: 56% (predicted by ML model)
Protein sequence
MDPYIARLFQIESGGNPNAVTGSNRGLGQFGPAEEAQFGLNDQNRTDPTAQAAAVQREAAQHSGVLARALGRQPTPGELYLAHQQGIAGGPALLTGGNIPAWQAIRPYYKSDAMAQKAISGNLPAGSGIDPATATADQFSRFWVGKFEGAKPAPFQAIPPAAAPPGIGLFGAQAAGGAPSPQGASLASFLPAGGPEPPPMPMFPQQQRAPVDMSMLQAFLKSQQIGQS
Physico‐chemical
properties
protein length:228 AA
molecular weight:23438,1 Da
isoelectric point:6,73
hydropathy:-0,27
Representative Protein Details
Accession
1ddn4
Protein name
1ddn4
Sequence length
210 AA
Molecular weight
23041,33960 Da
Isoelectric point
9,35638
Sequence
MVAVLRKRMAVSDNYYARIRQIESGGNDSARNPSGASGRYQFMPATWKSLGLDAADIMNPEAQEQAVRRLTARNYAFLQKSLGREPAPYELYIAHQQGASGALEALQGDRSAQLTRNMAANNPFGASSQGEWLTAWQNKFNRRDAAPAVDVTEGDDTIAATPQSPSAVTSNPYGRGYAIDLAKSLGSPVIYAERNRKRTPTFDEIYARFS
Other Proteins in cluster: phalp2_29691
Total (incl. this protein): 8 Avg length: 271,4 Avg pI: 7,89
Protein ID Length (AA) pI
1ddn4 210 9,35638
1oKcy 274 6,97496
3T2ny 279 7,93698
3X22b 324 9,25368
3g6jB 286 9,04145
4F0PJ 289 7,01316
6INDx 281 6,84139
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13388
4k2Rx
 17 37,6% 170 5.328E-28
2 phalp2_38966
81TMG
 12 30,6% 189 5.318E-23

Domains

Domains
Unannotated
Disordered region
Representative sequence (used for alignment): 1ddn4 (210 AA)
Member sequence: 6D7Pi (228 AA)
1 210 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6D7Pi
Method AlphaFoldv2
Resolution 74.96
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1ddn4) rather than this protein.
PDB ID
1ddn4
Method AlphaFoldv2
Resolution 68.22
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50