Protein

Protein accession
1lRaM [EnVhog]
Representative
1lRaM (this protein)
Source
EnVhog (cluster: phalp2_5031)
Protein name
1lRaM
Lysin probability
98%
PhaLP type
VAL
Probability: 59% (predicted by ML model)
Protein sequence
MLMTTRAIFETMRKAGFPPAVAITMTAIALRESGGNPAAFNGDTATGDRSYGLLQIDMLALGAGYLKTFGITDEKELFDAATNAHAGYMLWNHNNKNLETAWYIEKPVYRERFESHLPAAMWAALESPLGV
Physico‐chemical
properties
protein length:131 AA
molecular weight:14387,3 Da
isoelectric point:5,54
hydropathy:-0,09
Other Proteins in cluster: phalp2_5031
Total (incl. this protein): 14 Avg length: 139,7 Avg pI: 6,13
Protein ID Length (AA) pI
16kJj 140 5,24535
1jY49 133 8,88924
254FY 145 6,39094
4JEFN 148 4,63951
4JzIT 131 5,26758
4RnU9 153 4,64843
5ECLn 135 5,06955
5orqv 121 5,23234
5zMXH 140 10,19866
6D0O8 166 5,14929
6Tttt 135 6,54026
6XUDE 146 6,70913
hnQS 132 6,26777
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_5240
852fn
 20 37,6% 109 4.316E-21
2 phalp2_10556
8v0wb
 25 36,4% 118 1.895E-19
3 phalp2_4858
5vvbl
 1 43,9% 82 7.517E-17
4 phalp2_31496
3TtCH
 82 38,8% 85 1.411E-16
5 phalp2_14632
5BkR3
 1 34,6% 127 1.411E-16
6 phalp2_6609
1pbSm
 1 30,6% 101 2.647E-16
7 phalp2_26521
7XVtu
 369 32,1% 115 2.359E-09
8 phalp2_8459
165nm
 626 29,6% 108 8.232E-09
9 phalp2_8391
CgjB
 207 27,7% 90 2.100E-08
10 phalp2_3862
6IDp9
 274 28,5% 105 2.100E-08

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1lRaM
Method AlphaFoldv2
Resolution 97.21
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50