Protein

Protein accession
6B8Xr [EnVhog]
Representative
2GkpD
Source
EnVhog (cluster: phalp2_4420)
Protein name
6B8Xr
Lysin probability
95%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MIVVSELTDLIAEHEGKSLSMYTDTVGVPTIGYGHNLQTPISEHAAKVILADDVKVAIDELDDRMDWWRDLPDPGAASACIDGVQPWVASILALQKVNCCARG
Physico‐chemical
properties
protein length:103 AA
molecular weight:11132,6 Da
isoelectric point:4,41
hydropathy:0,08
Representative Protein Details
Accession
2GkpD
Protein name
2GkpD
Sequence length
81 AA
Molecular weight
8989,18160 Da
Isoelectric point
4,28591
Sequence
MIDELTNLIAKHEGKMLTMYTDTVGVPTIGYGHNLQEPISEAAALQILSDDVAVAVNELDDRMDWWRDLPHPAQLVLASMV
Other Proteins in cluster: phalp2_4420
Total (incl. this protein): 4 Avg length: 89,5 Avg pI: 4,52
Protein ID Length (AA) pI
2GkpD 81 4,28591
2f4Gt 97 4,78575
8Esft 77 4,60404
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10898
4A8EL
 88 43,0% 72 5.224E-11
2 phalp2_34971
4Fusc
 2 34,3% 67 7.277E-07
3 phalp2_37746
4jFtM
 29 29,1% 79 4.910E-06
4 phalp2_32125
6B6mf
 35 39,6% 53 1.626E-04

Domains

Domains
GH24
Representative sequence (used for alignment): 2GkpD (81 AA)
Member sequence: 6B8Xr (103 AA)
1 81 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6B8Xr
Method AlphaFoldv2
Resolution 83.92
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (2GkpD) rather than this protein.
PDB ID
2GkpD
Method AlphaFoldv2
Resolution 96.04
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50