Protein

Protein accession
1lRMd [EnVhog]
Representative
1lRMd (this protein)
Source
EnVhog (cluster: phalp2_20021)
Protein name
1lRMd
Lysin probability
96%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MADDTAVIKEFLVSLGFAIKEGDWKKFTDAVNRANKPVADADKRFASLTKTIEGLKNFVGAAATLGGLDRFVVAVDKVATNLDNLYWQSIRTSTSAQNLKALGYSMGQTGSSAQAAAQAIEAFTYAQKANPGLTGLLAGFGIQTHTVSGALRDQSAVMLDFFAKLKSMPEYLAIRYAALFGIGDIKTIESLMRNQKRFGDQHKAFARSIGLDMETATRQANDFKTAEGELFGDLDLLVLKGGASLIAWLEDVGNANGGQLGQLASDMQALSAAFRSLGDAFGLEGKTISGAIAAGFRGALAFLDELLKQITHTALALSALRKGDWAGAAKEAGLAVSTSPLGTLAKYATGRLPGQTGFVGAQPLPTARPGPAGTVAGPSAPAAHGLTDPLGTVSQRGSAILRLLTGYGVSLERARGIVAGMFAENNTLDPNRRNSISAGKSHAYGLGQWLGAGQREFASVFGHDIHKSNLGEQIAFMMYQWQKGSERPAGGMILGAASAGDAMTAYLANYMRPGTGLGGDLDRGGRALTSQPILISQKTEIHIHGVSDAKAAGAYVADQQTAVNARLARNFKSAVQ
Physico‐chemical
properties
protein length:576 AA
molecular weight:60263,7 Da
isoelectric point:9,31
hydropathy:-0,05
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_32382
wgVF
 186 32,7% 577 1.833E-44
2 phalp2_9729
42jr0
 2 28,5% 648 1.990E-30
3 phalp2_38983
872UN
 24 30,9% 634 4.624E-29
4 phalp2_34666
5EtFD
 1 26,5% 664 4.624E-29
5 phalp2_39305
4jkcC
 213 24,9% 729 1.824E-26
6 phalp2_7845
8HPe
 1 29,1% 635 5.673E-26
7 phalp2_30674
6PrQi
 4 27,2% 635 1.278E-24
8 phalp2_21476
8nhJC
 54 28,6% 593 3.958E-24
9 phalp2_18382
5GBoV
 74 27,6% 593 8.816E-23
10 phalp2_17471
4Y3rk
 6 26,3% 595 1.169E-22

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1lRMd
Method AlphaFoldv2
Resolution 57.31
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50