Protein

Protein accession
5zNmU [EnVhog]
Representative
1lgOb
Source
EnVhog (cluster: phalp2_32515)
Protein name
5zNmU
Lysin probability
94%
PhaLP type
endolysin
Probability: 71% (predicted by ML model)
Protein sequence
MRDKLNLFVENTQGEFQEVSSKSAIYQCMDLAYEWIFCLGFPKATIQNLYAYEVFTKPKQITFDYFELIPNTPDGFPIDGDLVVWKGGEAGHIAIALSGSTKDRLLIYEQNNPLGTNPHIQERSYKNVLGWLRPRIKFLGVQEITDQTKINIGGDFKEMEVQAIRSMLNDLWSDKKTLSEQLIGMSSSLKTERESRQGYEQFVDKLWEELKPVGKDKSTENILAEVKNLTSSDSTIQVIKTPEWALGIIKIIEAFFKRGGEKQNG
Physico‐chemical
properties
protein length:265 AA
molecular weight:30229,1 Da
isoelectric point:5,33
hydropathy:-0,42
Representative Protein Details
Accession
1lgOb
Protein name
1lgOb
Sequence length
239 AA
Molecular weight
27375,74150 Da
Isoelectric point
5,57257
Sequence
MKDKFNNFFNKWNGKPCEVNDPSNLNQCMDLAYAWCDELEVPRDAIRHLYAYEVYTKPNDITIKYFEMVPNTALAVPKVGDLVVFKGGTAGHISIRSEGASDTNSFESFDQNFGNTVNKCGLIRHPYDNVLGFLRFRVEKEPEITEQTILPIIDAHGKKMEVQAVRSKLADQDNEIAKLKTDKDYLLRDIDNLNIEKEALNTHINNLEGLPNAIHDVLYGSGWWWVKWAKIKKLVPEQS
Other Proteins in cluster: phalp2_32515
Total (incl. this protein): 7 Avg length: 254,3 Avg pI: 5,72
Protein ID Length (AA) pI
1lgOb 239 5,57257
2v6BO 249 5,57945
3OMtr 252 5,32584
3YRHA 278 6,55373
5fgeA 263 5,28395
UN3t 234 6,41339
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_5003
1e1XA
 91 35,5% 214 7.467E-33
2 phalp2_30026
2tAM9
 32 33,3% 156 3.092E-24
3 phalp2_39580
6iLgH
 177 30,9% 165 1.684E-18
4 phalp2_23027
3YRwb
 8 22,9% 205 1.906E-12
5 phalp2_14804
73AW6
 35 26,5% 166 2.820E-11
6 phalp2_34087
8rgxE
 1 26,9% 156 2.272E-10
7 phalp2_31563
4gxKM
 5 24,6% 154 1.437E-08
8 phalp2_9654
1P0dk
 1 21,9% 191 2.905E-04

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 1lgOb (239 AA)
Member sequence: 5zNmU (265 AA)
1 239 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1lgOb) rather than this protein.
PDB ID
1lgOb
Method AlphaFoldv2
Resolution 88.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50