Protein

Protein accession
5yWYJ [EnVhog]
Representative
5zQ3v
Source
EnVhog (cluster: phalp2_25878)
Protein name
5yWYJ
Lysin probability
94%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MEDVPPNTTGYDACVSQDRYIGGFATAGLGWVGRYIAPGTANAWKVVTPEESVALAIAGVKLMPIFESTAQRSLDGGAAGAADGQFALSCLPTVGLMPNDGVVLEGTTDFDPPPSAYPAIVAYYTALAAALAPSYGVGAYAGGAVLGALAGAIKVRWLTQSMGFAGTEAAIAAGDYDIIQRLPENFTVNGAAINVDLDSLRVPGFDFGARVPWDGAVPEGAPFNSASIQMLLNKAGQTPPLGVDDVSGQGTKAALAAWLAKGGFSALDWNGATQALLQAAGVPIFGSKPTAVAKAGGKSLWQELTSLI
Physico‐chemical
properties
protein length:308 AA
molecular weight:31252,0 Da
isoelectric point:4,41
hydropathy:0,26
Representative Protein Details
Accession
5zQ3v
Protein name
5zQ3v
Sequence length
314 AA
Molecular weight
32446,27950 Da
Isoelectric point
4,32007
Sequence
MTNPPNTTGFDACVDTSPYAAGLNAASITFVWRYAASGPSNEWKEIQQPEAILLGLLGINLAIVWETTANRSLSGAMAGTADGEDCKAFMLTVGLPPGLGCIVCPTTDMDIAESQYDAVKAYYAAFAAALGAGYQIGCYGSGYLINKLKNDGVIVLRWETQSMGFDDSAADAAAGDYDVIQRAVANLTVNGGVINVDPDSLHTPTVDVGARLPFNGCVPKNATFNAAINQVLLNKAGQTPPLGIDDASGNATNVALKAWLAKNGFPELAWGGAVEALLKQAGVAIYNPGDAPKLAADVAAAPAKGFIAEIEAEL
Other Proteins in cluster: phalp2_25878
Total (incl. this protein): 3 Avg length: 303,3 Avg pI: 4,37
Protein ID Length (AA) pI
5zQ3v 314 4,32007
1Y1Oq 288 4,38981
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26247
C0Uw
 10 31,1% 257 1.209E-27
2 phalp2_29092
6Wdu0
 51 32,1% 193 2.657E-23
3 phalp2_19087
1mGrN
 3 28,1% 270 4.409E-21
4 phalp2_8820
2pMjJ
 148 30,0% 253 1.971E-20
5 phalp2_4665
4E5hH
 25 28,7% 219 1.100E-16
6 phalp2_18096
45ElA
 1 29,7% 215 1.166E-15
7 phalp2_2850
giZX
 26 30,3% 201 2.348E-12
8 phalp2_15053
7qmsB
 8 24,8% 254 5.691E-11
9 phalp2_23126
4EcjY
 7 26,4% 268 2.406E-09
10 phalp2_18219
4N93g
 8 26,9% 260 4.272E-09

Domains

Domains
Rv2525c
Disordered region
Representative sequence (used for alignment): 5zQ3v (314 AA)
Member sequence: 5yWYJ (308 AA)
1 314 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08924

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5yWYJ
Method AlphaFoldv2
Resolution 89.43
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5zQ3v) rather than this protein.
PDB ID
5zQ3v
Method AlphaFoldv2
Resolution 87.62
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50