Protein

Protein accession
5yDki [EnVhog]
Representative
1yEff
Source
EnVhog (cluster: phalp2_5072)
Protein name
5yDki
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKLIWIALLVAGCNSDSAIYHIKRFYGLPVTTSKALIVSEAHRVAYKNNLSPSLLLALIETESSFRIQAESHKGARGLTQVMPFNAKRCGLHPDELWDLSLNLACGAQILREEIERLDSIKKALAVYNSGKHWSKAGKAYARKVLKLKKLIEEKNE
Physico‐chemical
properties
protein length:156 AA
molecular weight:17473,2 Da
isoelectric point:9,56
hydropathy:-0,14
Representative Protein Details
Accession
1yEff
Protein name
1yEff
Sequence length
114 AA
Molecular weight
12580,27200 Da
Isoelectric point
9,02153
Sequence
SEVDRAADAWNVSRSVLRALVQVESSYRPDALSPVGARGVAQIMPFNAKRCGLSHDQKLWDAVHNVRCGAQILAEELDQHGDLKKALTVYNCGRVKCREGEKYASKVIALSRVM
Other Proteins in cluster: phalp2_5072
Total (incl. this protein): 13 Avg length: 146,4 Avg pI: 9,44
Protein ID Length (AA) pI
1yEff 114 9,02153
15ib8 183 8,78048
22i9X 150 10,03239
2Oqe3 168 10,01112
2RkaH 151 10,36376
58ryx 123 8,98407
5D2b9 167 10,02182
5iI1c 157 9,80437
6GxCd 71 9,26554
6Lnoy 183 9,00857
6UoHQ 98 9,02211
A0A6J5M385 182 8,85655
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_4246
7W7hs
 77 69,9% 113 8.069E-57
2 phalp2_40124
7YNXd
 9 41,3% 116 1.852E-30
3 phalp2_27552
5rxEe
 14 30,2% 109 2.556E-16
4 phalp2_25246
42eCz
 1 34,1% 117 1.550E-14
5 phalp2_28619
8njq9
 5 29,3% 92 2.914E-14
6 phalp2_26388
1vB2c
 5 33,3% 111 1.936E-13
7 phalp2_5861
5xwUs
 3 29,8% 114 4.988E-13
8 phalp2_33078
4Ezj7
 2 30,2% 86 2.415E-12
9 phalp2_3949
7gIqH
 9 31,3% 99 4.538E-12
10 phalp2_37875
4T4us
 3 30,7% 130 6.220E-12

Domains

Domains
SLT
Representative sequence (used for alignment): 1yEff (114 AA)
Member sequence: 5yDki (156 AA)
1 114 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1yEff) rather than this protein.
PDB ID
1yEff
Method AlphaFoldv2
Resolution 98.09
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50