Protein

Protein accession
5y76f [EnVhog]
Representative
4vSdz
Source
EnVhog (cluster: phalp2_14400)
Protein name
5y76f
Lysin probability
76%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VTRLGADATSETIADLKALGITFIGRYASDFPEKNLSLPEAQRLSAAGIDIITNWENDVNDWQGGYGQGVAFAKRALAQHTACGGPTGRGERWGVYFSVDERVDPADARLHAYFQGANTVLSVEHTGAYAQTSALRTLRSLGLIGCGERGGTWRSMSTFGLPEGLGNPGEFDIEQTGWFNPSYDRNIANSQNFGQWRIGATVQIAPEDLMQDMIYAVGNAPDGSNPGLWLYADGHYRYIPTIAERDLLVAQFGFAEKPLPYAAHQVLLDLTAPPAVTLTDAQVAAIAEQVKVPTTITGTVTGKLS
Physico‐chemical
properties
protein length:305 AA
molecular weight:32795,2 Da
isoelectric point:4,88
hydropathy:-0,19
Representative Protein Details
Accession
4vSdz
Protein name
4vSdz
Sequence length
317 AA
Molecular weight
33522,21130 Da
Isoelectric point
5,07012
Sequence
VTRLGADATSTSIPALRSLGASWVSRYLSDYPWKNLTPTEAKALTAAGFDLVSNWENDVDDWATGQGAAFARRAAAQHAACGGPSWAPIFFSVDEKVDPADPRLHQYFRDINGVLGVSRTAAYAQTSVLRVLRSLGLISFTWRSMSTFGLPEGLGDPGEFDIEQTGAFNADYDRDVANSTYFGQWRIGATAPAHALQEVTMDALYAVNPGPNQEAAGIWLLLGGHYTHVPTIADRNTIVAKLGIAEKPLDYDAHLVLLAATGAPAPAPVDAKALAAAVVTGLTPIVNAALQAGQAVDYDHLAVVVESHLAATLAQAK
Other Proteins in cluster: phalp2_14400
Total (incl. this protein): 3 Avg length: 309,0 Avg pI: 4,96
Protein ID Length (AA) pI
4vSdz 317 5,07012
5EFpi 305 4,93677
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_7163
2Sbyu
 4 47,9% 196 1.683E-50
2 phalp2_2671
6XA7X
 2 46,3% 205 1.483E-49
3 phalp2_12671
1ZrhB
 6 42,5% 195 4.495E-41
4 phalp2_21315
1Ivyn
 20 28,6% 230 3.528E-17
5 phalp2_31904
4LoIq
 28 32,5% 209 2.189E-15
6 phalp2_6406
boMu
 55 32,0% 203 7.588E-13
7 phalp2_20415
3dkyH
 32 29,8% 231 1.392E-10
8 phalp2_11951
2Su7N
 2 28,0% 232 1.853E-09

Domains

Domains
Rv2525c
Unannotated
Unannotated
Representative sequence (used for alignment): 4vSdz (317 AA)
Member sequence: 5y76f (305 AA)
1 317 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08924

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5y76f
Method AlphaFoldv2
Resolution 79.39
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4vSdz) rather than this protein.
PDB ID
4vSdz
Method AlphaFoldv2
Resolution 85.06
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50