Protein

Protein accession
5y0cG [EnVhog]
Representative
hMrD
Source
EnVhog (cluster: phalp2_29272)
Protein name
5y0cG
Lysin probability
92%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MVWIGDTNHRFAPALLTLLSQLEERWPGKGWLNSPQTGTIGDLAHQAESNSDHNPWLNNTVRALDVAANVSGVPGIVTVTDAPDCEALFAMANRMYGARDPRVWPDGYAMFHHRITDPANPGQFKPTASWQDPHLYHLHISVSQNPAGYNSTAPWPLPDETPSTSSGGATKVTPAATTGGRMFEIIHNIDNGAVRACGPGFWASLNGATPQETLAIVEVFRTSPLCADNKVTDVSTARMQLKYNVFMKGKTA
Physico‐chemical
properties
protein length:252 AA
molecular weight:27302,3 Da
isoelectric point:6,11
hydropathy:-0,33
Representative Protein Details
Accession
hMrD
Protein name
hMrD
Sequence length
250 AA
Molecular weight
26852,01180 Da
Isoelectric point
6,65161
Sequence
MVWTGGDGDRLAPALLTLLHQLQAAYPGQGWVNSPQTGTIGDRAHRREPSSDHNPWLDSTVRALDVAVNVSGVPGIVTVTDGPPGAELAAMVNRMFALKDPRVWPDGYAIFRARITDPANPGGTKPYAGDDPHLYHVHISVSRNPAGFNSTEPWPLSGESSSSSGGVKIPPPVVSGGRMFRIIHNVQTNAYRLVMPGVWSALEGSTPKETEAIVEYFRKDPLCAGNKVEDVSNAGMQLIYNAYMKGKATL
Other Proteins in cluster: phalp2_29272
Total (incl. this protein): 2 Avg length: 251,0 Avg pI: 6,38
Protein ID Length (AA) pI
hMrD 250 6,65161
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_4027
15vGm
 7 32,2% 158 4.025E-18
2 phalp2_19633
4jViv
 6 35,0% 157 1.921E-14
3 phalp2_32428
UbvX
 6 32,4% 154 3.505E-14
4 phalp2_39293
4f6EK
 17 33,3% 174 2.122E-13
5 phalp2_8424
SmEG
 4 30,8% 178 1.278E-12
6 phalp2_14351
4eT00
 1 34,1% 164 1.723E-12
7 phalp2_5823
5e2qa
 2 30,9% 207 1.389E-11
8 phalp2_39312
4kyeu
 9 27,5% 214 3.627E-10
9 phalp2_4625
4ojUz
 1674 32,3% 167 1.587E-09
10 phalp2_16726
SkX2
 1 25,1% 175 1.293E-07

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): hMrD (250 AA)
Member sequence: 5y0cG (252 AA)
1 250 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (hMrD) rather than this protein.
PDB ID
hMrD
Method AlphaFoldv2
Resolution 82.19
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50