Protein

Protein accession
5vode [EnVhog]
Representative
6VNQk
Source
EnVhog (cluster: phalp2_336)
Protein name
5vode
Lysin probability
62%
PhaLP type
endolysin
Probability: 85% (predicted by ML model)
Protein sequence
LRFDPVKGLRPWVVGELLNPSRKAYDCSGLVACALREVSGFDIRAKWNTGLMLESTKTYAARDFYHAQLRFYGPSVVNHVAFAFPSRGAWDDSVMLLEAAGAGSDAINETVAMKLGASVRYAEEGVRQDDLIAWVPLWSLGVAAGAVPKP
Physico‐chemical
properties
protein length:150 AA
molecular weight:16315,5 Da
isoelectric point:6,93
hydropathy:0,05
Representative Protein Details
Accession
6VNQk
Protein name
6VNQk
Sequence length
191 AA
Molecular weight
20725,51730 Da
Isoelectric point
8,40469
Sequence
VTAAEWANVAGAFERRVLLKAMGQKGFPGASTPYVWKGKGDVAFDVQKGLRPWLTSEVRPGGKAFDCSGFVLWAAREVTAIDVRSKWNAQVILDACREWESAEPLHATLRFYGVSRKDITHVAFGLVAARDAMPCLVLEAAGAGSDATSETKARELGAEVRFVEDKRPDFRCDVPLWALGVGLGHLARPAL
Other Proteins in cluster: phalp2_336
Total (incl. this protein): 11 Avg length: 159,4 Avg pI: 7,34
Protein ID Length (AA) pI
6VNQk 191 8,40469
2Ti7c 143 5,17061
3QzLk 157 9,41143
4CVVI 163 5,66784
4eRBP 136 7,68357
4euQg 144 6,07782
5JFfw 180 8,72607
6HRty 161 7,78638
6Vm1U 185 9,29500
DG7P 143 5,62663
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26078
7s07Z
 53 30,7% 169 1.541E-23
2 phalp2_7249
3QzVS
 32 29,8% 134 9.895E-18
3 phalp2_29063
6QfOM
 447 28,0% 125 2.241E-14
4 phalp2_27807
7Tiwg
 23 26,5% 158 2.626E-13
5 phalp2_1556
40W37
 2 25,6% 160 2.204E-10
6 phalp2_6899
2tG8S
 2 28,5% 154 1.367E-09
7 phalp2_33743
ZDk4
 1 26,4% 136 4.603E-09
8 phalp2_3467
4b9No
 1 26,8% 160 1.545E-08
9 phalp2_13320
3PD8H
 22 21,7% 161 1.233E-04

Domains

Domains
Unannotated
Representative sequence (used for alignment): 6VNQk (191 AA)
Member sequence: 5vode (150 AA)
1 191 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6VNQk) rather than this protein.
PDB ID
6VNQk
Method AlphaFoldv2
Resolution 94.62
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50