Protein

Protein accession
1joDy [EnVhog]
Representative
1joDy (this protein)
Source
EnVhog (cluster: phalp2_38783)
Protein name
1joDy
Lysin probability
99%
PhaLP type
endolysin
Probability: 50% (predicted by ML model)
Protein sequence
MTMTPRVIDISHHNSVASFEAVASAGIWGVIHKATQGSSYRDPDYVKRRSAAKAAGLLWGAYHFNDGSDIVSQVSNFLRYADPDAETLLVLDFEDNPKSNMSITQAVQFLKLVETRGYNCAIYSGNRLKENIGKLSAADRAYLCEKLLWLCQYGPQARLPDGFTDFFLWQYTDGRVGPQPHTIPGVGGEVDLNVVSKQIDSQETLALVWHSGGEPTSGEPTSSHTVEAQSDHVDSAPPVSRSGGPRPGRYDHRVLILQQDLHDMGYFTVGDLDGKWGSQTAGAVTTFYIDRGIEAVPAMNDQLMDAVDDAINENWQRPINDSRASAAPKDLKHLDTVRLSLIQRFWAKVAAGGAAVGLTGNSVSDYFSSVQDKMSSVKDAFAKVPPEAWFVLAGLLACAVWYASTKAAKAATSDYNKGRLN
Physico‐chemical
properties
protein length:421 AA
molecular weight:45864,8 Da
isoelectric point:5,66
hydropathy:-0,29
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_34200
2Sjuy
 1 50,3% 433 1.260E-123
2 phalp2_5981
6El6s
 21 33,4% 308 5.624E-25
3 phalp2_32148
6IdkO
 1 31,0% 367 2.698E-19
4 phalp2_36673
7XMsp
 15 29,8% 308 1.033E-13
5 phalp2_34359
474YH
 38 27,4% 324 1.677E-11
6 phalp2_1549
3LwuQ
 17 27,4% 328 3.718E-10
7 phalp2_33266
5EtB5
 7 27,8% 276 1.475E-04
8 phalp2_40474
4vV8j
 3 26,7% 284 4.508E-04
9 phalp2_39522
5tE9K
 5 25,4% 342 4.508E-04
10 phalp2_24068
8akZZ
 1 24,1% 315 7.879E-04

Domains

Domains
GH25
Unannotated
Unannotated
Protein sequence: 1joDy
1 421
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1joDy
Method AlphaFoldv2
Resolution 81.99
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50