Protein

Protein accession
1jmb3 [EnVhog]
Representative
1jmb3 (this protein)
Source
EnVhog (cluster: phalp2_655)
Protein name
1jmb3
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTATEKDRDILARTLWGEARGERLAGQIAVAWTICNRVNDGNTKSWWGEGYAGVCQKPYQFSCWNKSDPNYTYLSGAKAIPFR
Physico‐chemical
properties
protein length:83 AA
molecular weight:9391,5 Da
isoelectric point:8,91
hydropathy:-0,61
Other Proteins in cluster: phalp2_655
Total (incl. this protein): 22 Avg length: 97,3 Avg pI: 7,66
Protein ID Length (AA) pI
1KBNt 144 9,21706
1MAo6 144 8,33165
1hJ36 96 6,23844
1jlNP 83 9,29939
1my5t 79 6,15131
20BEc 105 5,13219
2CPZD 144 8,47593
2fLH0 108 5,34914
2gcqK 145 6,72618
3X8Ty 95 7,68369
3eyXJ 96 8,65889
3fb4K 86 8,73548
4EEZw 108 9,18025
6DCEy 80 7,75445
6DVJ7 88 8,76662
6EIUu 65 4,95741
6F4ms 76 7,76338
6GGg1 88 7,75445
6RwqN 71 5,48391
7nWZr 66 9,03178
QIbd 91 8,90529
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_32566
1Fd5o
 3 69,4% 59 4.571E-24
2 phalp2_21672
3799D
 3 39,2% 56 4.187E-07
3 phalp2_8307
8Asy8
 29 43,7% 64 5.754E-07
4 phalp2_20123
24eIQ
 4 38,9% 59 3.877E-06
5 phalp2_6432
8ABMe
 1 34,7% 72 1.901E-05
6 phalp2_12408
8Erth
 12 36,2% 69 4.933E-05
7 phalp2_3381
3sW2y
 1 37,5% 64 9.315E-05

Domains

Domains
Hydro_2
Protein sequence: 1jmb3
1 83
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07486

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1jmb3
Method AlphaFoldv2
Resolution 93.26
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50