Protein

Protein accession
5nd0Q [EnVhog]
Representative
4870A
Source
EnVhog (cluster: phalp2_25616)
Protein name
5nd0Q
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MLNYAISSKLITLLIAFEGFSSCAYWDVSQYSNGHGTKAAHKYECIDQRVARDRLISHAEKDIKFIKNIYKDRKPTDSELVSLASFCYNTGPRGCEKVVKLAANGEHRAASWAMRQNIKKGSGYEEGLKIRRAKETALLLEAAEKPSFTEWIISGYDY
Physico‐chemical
properties
protein length:158 AA
molecular weight:17864,2 Da
isoelectric point:8,97
hydropathy:-0,44
Representative Protein Details
Accession
4870A
Protein name
4870A
Sequence length
160 AA
Molecular weight
17852,22190 Da
Isoelectric point
8,58366
Sequence
MLSYAAMSKLIALLITLEGFSACAYWDVSQYSIGYGTRANSKYECIDKNAGKSRLINHLQGDIKFIKSVFSAKNSKPEETEIIGLASYCYNMGHNGCKKAVQLAANDEHRAASWVMRKEIKKGSGYEEGLTIRRAKETALLLEAAEKPSFTEWIISGYDY
Other Proteins in cluster: phalp2_25616
Total (incl. this protein): 6 Avg length: 152,7 Avg pI: 8,43
Protein ID Length (AA) pI
4870A 160 8,58366
17ZZp 160 8,27034
5y6Uh 129 6,46341
8vMeS 159 8,92521
A0A6J5MI31 150 9,36360
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_14647
5H6Y6
 20 47,0% 134 2.464E-42
2 phalp2_23797
1duFR
 19 30,8% 136 1.881E-15
3 phalp2_9007
4WhBz
 18 29,6% 135 6.549E-15
4 phalp2_4415
2EHur
 207 29,9% 147 1.221E-14
5 phalp2_5874
5BWv1
 1 34,3% 131 1.221E-14
6 phalp2_18164
4uApd
 5 30,0% 143 3.109E-14
7 phalp2_12817
8iWIN
 6 27,7% 137 4.245E-14
8 phalp2_16325
5kZ2q
 25 30,6% 137 7.912E-14
9 phalp2_31073
1Mrll
 7 31,5% 133 3.297E-12
10 phalp2_35423
8yB6R
 1 29,2% 140 2.890E-11

Domains

Domains
GH24
Representative sequence (used for alignment): 4870A (160 AA)
Member sequence: 5nd0Q (158 AA)
1 160 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4870A) rather than this protein.
PDB ID
4870A
Method AlphaFoldv2
Resolution 92.71
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50