Protein

Protein accession
5md9K [EnVhog]
Representative
81TMG
Source
EnVhog (cluster: phalp2_38966)
Protein name
5md9K
Lysin probability
99%
PhaLP type
endolysin
Probability: 83% (predicted by ML model)
Protein sequence
MADILDLIRQRAAAAGVDPATALTIARIESNFDPTSNMNRATQYKGLFQLGRNEWATHGSGDIYDPTANTDAFLKLYNNNASALAKSLGRAPTPQEAYLAHQQGVTGATALLSNPDKNAVDVIAPFYKNRATALSAIKGNGGDPNGTAGDFVNAWTNKYNTYAANYGGGGNNTATASAPAGTGNSTLPMFAQAGMQPQVAAANTASAANSTTAQPTKDFNFAGLASSGLGLMAAGAPRQTWTPSSTAPPVHQAQAADLMGILAQPTLQTDDMKRRYMMGLLG
Physico‐chemical
properties
protein length:282 AA
molecular weight:29202,1 Da
isoelectric point:7,91
hydropathy:-0,31
Representative Protein Details
Accession
81TMG
Protein name
81TMG
Sequence length
276 AA
Molecular weight
29734,18860 Da
Isoelectric point
6,84986
Sequence
MSNIQDLIRRKAEQYGVDPAMMTRIAQIESSLNPRADNGKYRGLYQFGQQEWKDWGKGDIFDPEANVDAAARRMKNLVMPAIDRATEGKSEPHHYYLGWQQGVSGGPALIANPNQPAAETLAPFYGNGDPMAGLKMATSAVTRNDGGAGWTGKDFLEHWKNKYNGVPAMPSTQNVGGPAGGLLGVTPTEAPADDADLAGYNRTGVVQLPPGAAEQPKSFNNAGLMATGMQTMAAGTPQQPEWMTQAMKSKLPAYRPEAMGLLSTDDPRRRRGLLGM
Other Proteins in cluster: phalp2_38966
Total (incl. this protein): 12 Avg length: 288,3 Avg pI: 6,98
Protein ID Length (AA) pI
81TMG 276 6,84986
1Oy1w 292 6,22395
1wkgT 278 5,98392
2kvNw 336 9,84473
48mZc 301 9,11359
6DGqB 271 6,59187
6KFhf 273 6,43175
8tB43 269 5,94248
CaXN 292 6,11175
QNbo 317 6,29335
kRf4 272 6,50428
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_19004
11ItM
 13 34,1% 199 1.251E-49
2 phalp2_16532
79MIm
 35 39,4% 175 2.566E-42
3 phalp2_25486
3aYtU
 27 30,0% 216 3.150E-34
4 phalp2_915
8kbQC
 3 30,2% 175 3.219E-22
5 phalp2_6229
6se0Y
 5 28,0% 260 6.300E-19
6 phalp2_23724
L6pS
 5 21,8% 183 3.483E-16
7 phalp2_35289
6WxEj
 1 24,2% 239 9.310E-15

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5md9K
Method AlphaFoldv2
Resolution 67.55
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (81TMG) rather than this protein.
PDB ID
81TMG
Method AlphaFoldv2
Resolution 70.86
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50