Protein

Protein accession
5lsdH [EnVhog]
Representative
1B3Vu
Source
EnVhog (cluster: phalp2_11651)
Protein name
5lsdH
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAEMFAEHAATFGIELIVHYAAKPYGRSWRCDRGTWRPATAGQLVGGGTTWADWLHVELDPATADSPERVSAAWAAVLGGVTAPPGAPKYPGRPLKRGSRGISVERIQTRLGLTVDGWFGPVTEQAVRRFQTARRLTVDGIVGPITWAALFGS
Physico‐chemical
properties
protein length:153 AA
molecular weight:16483,6 Da
isoelectric point:9,73
hydropathy:-0,13
Representative Protein Details
Accession
1B3Vu
Protein name
1B3Vu
Sequence length
152 AA
Molecular weight
16637,67980 Da
Isoelectric point
8,84656
Sequence
ASDLQIEAVFDYCPKPHGRGWMCDRDAWRVYDRKAFSGSPGGDWVHVEIGTRFCQDADYYEQKMAKLLGGKKPARKPATKNKAAPAYPGKSLRKGDKGDDVKLVQEKVGAYVDGDFGPKTEKSVKAWQADNTACCGPSDGIVGPKTWGCMFG
Other Proteins in cluster: phalp2_11651
Total (incl. this protein): 4 Avg length: 160,5 Avg pI: 7,72
Protein ID Length (AA) pI
1B3Vu 152 8,84656
4A1Jj 157 7,06454
5AbzR 180 5,23558
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23860
1vIsX
 2 83,5% 97 9.286E-43
2 phalp2_25172
1OByG
 10 39,2% 107 2.764E-21
3 phalp2_32180
6T2Qb
 1 32,0% 125 8.364E-14
4 phalp2_4737
7CP49
 2 28,0% 114 5.788E-11
5 phalp2_216
5St5t
 5 31,6% 120 3.335E-07
6 phalp2_30972
1fvaq
 54 21,7% 129 6.167E-07

Domains

Domains
Unannotated
PG_1
Representative sequence (used for alignment): 1B3Vu (152 AA)
Member sequence: 5lsdH (153 AA)
1 152 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5lsdH
Method AlphaFoldv2
Resolution 88.33
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1B3Vu) rather than this protein.
PDB ID
1B3Vu
Method AlphaFoldv2
Resolution 85.99
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50