Protein

Protein accession
5kgYB [EnVhog]
Representative
4qzt4
Source
EnVhog (cluster: phalp2_27322)
Protein name
5kgYB
Lysin probability
92%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSWGGLNPALTSWRNGINALFPGRATTSDGGYADSAHGGTSQHQPDSDGSVDAFDMDNQLLGSNEPSGNDDERRLLEALKLDFEADPRAHLWISHQEIAQHDTSTPWAEKDYDGASPHDEHTHWQSHEQNEDDGRPWKFPHTEQALEDMMTPEQFIELFQAALADPDVAAKMRAFAWQYAGSPLTPPNRSTAWILSDIQKYGPAIAGIQATLDEFIAAADPGGPPAAG
Physico‐chemical
properties
protein length:228 AA
molecular weight:24886,7 Da
isoelectric point:4,42
hydropathy:-0,72
Representative Protein Details
Accession
4qzt4
Protein name
4qzt4
Sequence length
218 AA
Molecular weight
24270,68740 Da
Isoelectric point
6,11380
Sequence
MSAWRLNAFLTSWRAAIDWEFPHRTRLSDGTLGDLAHSKTVSEHNPDSDGSVDAYDCDLNLFGSSNPLGSVAEVKAMHELIAEFQHQTQAQLWIFQRNIANRDIGNWKVRAYAGSSPHDHHAHFQSVQTRERQPYTGDLDRVFTAINAKPAAAKLGSRTLERGMTGPDVAYVQRWLGIDDDGIFGPDTQAAVLAYQRMRGIPANGQVDATTWVQLGIR
Other Proteins in cluster: phalp2_27322
Total (incl. this protein): 17 Avg length: 229,5 Avg pI: 5,28
Protein ID Length (AA) pI
4qzt4 218 6,11380
1FQHL 236 4,69362
1IsMi 264 4,57795
28y3I 227 5,38205
2eMqW 235 4,73920
4dYHH 229 4,84845
4mZ29 222 4,97008
4muLT 222 4,77137
5kl3o 205 5,56354
5nDar 234 4,92410
6FT8R 234 4,82116
6FTiZ 221 5,19846
6Grn5 246 4,93859
6RNE6 229 5,13508
6VNKi 224 5,91457
7d2Fj 228 8,82251
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_30242
4eMiX
 353 35,2% 224 1.521E-42
2 phalp2_16650
gydT
 31 34,7% 213 2.663E-33
3 phalp2_5653
4qGYj
 5 31,3% 220 4.974E-33
4 phalp2_398
7qxjv
 88 26,5% 264 2.908E-26
5 phalp2_30097
36Djl
 42 27,3% 219 1.876E-25
6 phalp2_27126
2SNlK
 2 31,3% 150 2.458E-18
7 phalp2_37469
30gC4
 5811 34,8% 135 2.458E-18
8 phalp2_34204
2SThB
 8 23,7% 236 1.330E-16
9 phalp2_8424
SmEG
 4 30,5% 157 1.540E-15
10 phalp2_13599
5lflK
 10 24,8% 209 1.405E-11

Domains

Domains
Unannotated
PG_1
Representative sequence (used for alignment): 4qzt4 (218 AA)
Member sequence: 5kgYB (228 AA)
1 218 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5kgYB
Method AlphaFoldv2
Resolution 81.66
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4qzt4) rather than this protein.
PDB ID
4qzt4
Method AlphaFoldv2
Resolution 91.36
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50