Protein

Protein accession
5kd8H [EnVhog]
Representative
1Dp8S
Source
EnVhog (cluster: phalp2_701)
Protein name
5kd8H
Lysin probability
91%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
LSKGPVRASSRAGPLLALLLLLFPAPVAAASRQWLLADSGATPVELAQGWALRTLGPEEYGYLWLVVFNESSWRPDAVNPRSGACGLAQAWPCSKLSSVVPGWRTDPLGQLRLFVVPYGLGRYGSFRAAWAYWCTWGRW
Physico‐chemical
properties
protein length:139 AA
molecular weight:15231,4 Da
isoelectric point:9,72
hydropathy:0,13
Representative Protein Details
Accession
1Dp8S
Protein name
1Dp8S
Sequence length
137 AA
Molecular weight
15084,92770 Da
Isoelectric point
7,74314
Sequence
MVASATTLAPVALITSPIPTSPSPIPRPPTRSLIAPDPPPPTVAQAKAWARETLGSAEYEALDRIIWNESRWDPAAVNPRGGACGLGQSWPCSKLSSVVPDWPTQPVEQLQWFIAYGEHRYGNLRNAWTYWCAHGRW
Other Proteins in cluster: phalp2_701
Total (incl. this protein): 6 Avg length: 145,5 Avg pI: 7,54
Protein ID Length (AA) pI
1Dp8S 137 7,74314
1MB5m 182 9,20746
4exlS 154 5,28684
5JgJR 134 5,59918
6LkpK 127 7,67056
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8143
6PPH9
 51 45,7% 83 5.543E-31
2 phalp2_25328
8iuMX
 22 33,6% 119 8.890E-26
3 phalp2_5873
5BDhB
 15 42,3% 92 1.005E-23
4 phalp2_33782
1b2W0
 33 35,4% 127 1.378E-23
5 phalp2_11782
870N1
 4 47,0% 85 2.643E-20
6 phalp2_29608
7ZKXR
 3 33,9% 106 1.043E-17
7 phalp2_26424
1LsRN
 11 26,6% 109 5.023E-17
8 phalp2_6108
5elq8
 169 30,2% 129 1.766E-16
9 phalp2_34057
8vK6v
 8 35,0% 117 8.493E-16
10 phalp2_20998
7ANG1
 61 32,3% 133 1.433E-14

Domains

Domains
Disordered region
Unannotated
Representative sequence (used for alignment): 1Dp8S (137 AA)
Member sequence: 5kd8H (139 AA)
1 137 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1Dp8S) rather than this protein.
PDB ID
1Dp8S
Method AlphaFoldv2
Resolution 84.52
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50