Protein

Protein accession
5ipsq [EnVhog]
Representative
3MDMr
Source
EnVhog (cluster: phalp2_5192)
Protein name
5ipsq
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MGVDFTGFATVRAVANGVVAHVGYRAGWEPGGNMVWINHDGYLSRSLHLVTNSQTVAVGQAVVAGQPLATMGNTGIGSGVHLHLEIAPGGGGQVDPVPYLQNLINANTPDPEPVPKEDDMAYPITCNGRAYLVAPGYIKSLNTQPDADLTRNIVSATDTWIALTETQFHGQLSSFGIPSSVVNLATGAVTNAETGLPEGGGVWTWARLAVVNTNRILAKL
Physico‐chemical
properties
protein length:220 AA
molecular weight:22995,6 Da
isoelectric point:5,36
hydropathy:0,05
Representative Protein Details
Accession
3MDMr
Protein name
3MDMr
Sequence length
279 AA
Molecular weight
29922,45750 Da
Isoelectric point
5,67966
Sequence
VAILWPNGRTTPPPISSGFGPRGSGAYGDASTWHLGTDFYGYDTIHAIADGTVVYVGWNSGVGWSSVAGYMVWVQHDGFFSRSLHTAAATARVSVGDQVRAGDPLIDMGYSGLFDGAGNPAPWRKHHHLEITPGQWHAGNTGQVNPYTWLAEHVGGSATGAGGGGTEISNDTNQSEEDDMRYLKLKDNGRLYQVGPEFINGVDGADGENKAWADAGLPGYTEVARWSFDRILRHHAIPENVVNAAGDVLDDLTGGTRYVRHGSWSRAQKVERLAYVAGK
Other Proteins in cluster: phalp2_5192
Total (incl. this protein): 4 Avg length: 263,5 Avg pI: 5,83
Protein ID Length (AA) pI
3MDMr 279 5,67966
7hFju 274 6,29511
7xiZf 281 5,98341
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1551
3MFaL
 4 68,7% 189 1.973E-81
2 phalp2_25231
3ObmF
 1 37,1% 191 1.034E-32
3 phalp2_8242
7xj4I
 2 23,4% 307 2.230E-23
4 phalp2_6940
2RX5W
 1 30,4% 220 2.136E-21
5 phalp2_36887
7ub2Y
 40 30,8% 178 1.317E-20
6 phalp2_13843
7k2Ej
 3 31,0% 187 1.007E-17
7 phalp2_26649
2g35l
 5 27,1% 236 3.348E-17
8 phalp2_17370
4GXf7
 2 25,2% 226 9.017E-16
9 phalp2_22360
8MADT
 6 27,9% 258 1.508E-12
10 phalp2_39908
1iVNq
 39 23,4% 196 9.747E-09

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 3MDMr (279 AA)
Member sequence: 5ipsq (220 AA)
1 279 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5ipsq
Method AlphaFoldv2
Resolution 72.33
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3MDMr) rather than this protein.
PDB ID
3MDMr
Method AlphaFoldv2
Resolution 63.61
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50