Protein

Protein accession
1hod3 [EnVhog]
Representative
1hod3 (this protein)
Source
EnVhog (cluster: phalp2_32502)
Protein name
1hod3
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MYINLKKLCAFWLGCTILAGCNPVQASPTSDAAQFKESYTLVTDPETGVRDDYRSIPELQRLLPLDIKEASDMLYEDRREIECLAWNLYFEIRGGKPNEQIAIAYVPINRIGKSEFASSVCANVFQYHMVNGKIKHQFSWVGRKFGKSFKIEPDSWQKMQQLAIQVWNKKLKDTGRGSTYFHSVNVGPQWANNTIKFTLGSHIFWKEVK
Physico‐chemical
properties
protein length:209 AA
molecular weight:24050,3 Da
isoelectric point:9,02
hydropathy:-0,38
Other Proteins in cluster: phalp2_32502
Total (incl. this protein): 9 Avg length: 204,0 Avg pI: 9,21
Protein ID Length (AA) pI
24AnF 186 8,98742
48RWK 209 8,88331
48T6V 182 8,83193
4aTD3 183 9,91409
4cxgY 254 8,34880
6LMmn 184 10,17622
6Meb1 184 9,76420
7F6aM 245 8,95725
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27147
30ADU
 1 55,4% 155 4.579E-72
2 phalp2_15984
7KpQ6
 448 37,0% 135 4.523E-22
3 phalp2_2416
54zSE
 377 35,6% 129 1.563E-21
4 phalp2_12064
5eok8
 21 32,5% 129 1.002E-20
5 phalp2_37440
2KS36
 1494 35,6% 132 8.741E-20
6 phalp2_4699
4KCq2
 1 29,9% 167 4.098E-19
7 phalp2_4108
1zenp
 45 33,5% 134 7.598E-19
8 phalp2_8528
1rrcd
 232 32,6% 147 2.611E-18
9 phalp2_15462
87Yrl
 67 29,7% 158 6.583E-18
10 phalp2_19867
5DmT3
 416 34,3% 131 3.071E-17

Domains

Domains
Disordered region
Hydro_2
Protein sequence: 1hod3
1 209
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07486

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1hod3
Method AlphaFoldv2
Resolution 82.79
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50