Protein

Protein accession
5Ym5q [EnVhog]
Representative
3wjGA
Source
EnVhog (cluster: phalp2_5182)
Protein name
5Ym5q
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNNIEERLLTINPYSRSGEKQNKIEKIVVHWVGNAGSSALGNRNYFESLATSHKTYASSHYIIGLNGEIIRCIPENEVAFHSGSYSMNRKSIGIEDCHPDWDGKFNDNTYNSLVELCADICKRYNLGIDAIIRHYDVTGKECPRYYVRNEQAWIQFKNDVANKIGQATTNVAVPKVEGSDEPVRRYKNGSTKEIIYADTSLTKVIGSLSPYEECDCFGIFNGRPMVRYNVSGTGNYKIGFAKWTGGVR
Physico‐chemical
properties
protein length:248 AA
molecular weight:27931,0 Da
isoelectric point:8,08
hydropathy:-0,53
Representative Protein Details
Accession
3wjGA
Protein name
3wjGA
Sequence length
244 AA
Molecular weight
27389,48490 Da
Isoelectric point
7,99906
Sequence
MQITNVTCPISKYSIKCPYEMTPAGICVHNTANDASAMSEVSYMLGNNNKVSFHAAVDNERVVTGIPFNRNTWHCGDGGSGKGNRTQISIEICYSKSGGERFDEAENLAACYIAYLLKQYGWGIEKVTKHQDYNGKYCPHRTLDLGWERFLNKIREHLGIQTTPVEDNKDYSGGSDEPVRKYVNGSTIENIYADTALTKKIGYLNPREECDCFGIYNNRPMVRYKVDGSNNYKIGFAKWTGGVK
Other Proteins in cluster: phalp2_5182
Total (incl. this protein): 273 Avg length: 267,7 Avg pI: 7,93
Protein ID Length (AA) pI
3wjGA 244 7,99906
11teD 242 9,15543
13qxo 237 8,11278
14yCm 215 9,07201
1GAiP 279 9,58227
1HmOy 218 9,04867
1dgbh 287 8,40050
1gNV9 284 9,24027
1k3gI 311 8,57947
1kgFz 295 7,58411
1knQ0 243 6,15074
1neVY 316 6,60812
1o2Eo 224 8,08732
21sm4 242 8,26048
21tEf 242 9,15208
21yXJ 242 9,28224
233T3 241 7,56671
23OGx 162 6,94131
24C6x 241 8,69551
2HnGo 318 9,70373
2KnF0 337 9,00747
2Uqhq 341 8,47090
2WF3s 314 8,12297
2WF5t 315 6,71453
2XvWp 299 9,54037
2ach3 181 9,23453
2w0g 241 5,99233
30GM 218 9,25793
3B0kY 242 8,65232
3GQ4d 316 7,00560
3PGX2 249 6,45051
3TFBM 242 9,37333
3THVI 244 9,18670
3TJjI 249 6,44943
3TS6z 242 8,48844
3VLmn 250 6,94126
3Wz80 240 9,15756
3bYxt 230 9,32627
3cas6 275 9,38868
3fJ48 241 7,50612
3iCSW 242 7,02180
3kb44 314 9,61825
3l8pK 247 6,66468
3lNkR 246 5,80789
3lZQE 247 8,07417
3lrq0 241 9,52703
3meBb 246 5,49272
3mqip 242 7,55779
3o2PL 318 9,55455
3qAGu 316 6,11164
3rrpA 304 8,45601
3tDhe 246 5,61435
3tXXF 248 8,03291
3tm2b 206 7,00151
3u3S2 304 8,63923
3u8Fc 247 8,07429
3uGCe 326 8,56986
3uGdJ 302 9,14988
3uexN 241 6,12374
3ulrz 247 7,57848
3uq8C 304 8,59720
3uzOO 245 8,35499
3v2K9 247 8,07861
3w1jc 316 6,11164
3witd 247 6,66297
3wmqz 243 8,30761
3x4Y2 241 7,51556
3x5yj 241 6,12494
3xIjl 302 8,37027
3xN1Y 247 8,08287
3xSVP 213 9,23859
3y4tb 248 8,36524
3yBSn 304 8,59720
3ycmf 248 8,37588
3yfIV 247 8,07861
3ywLu 246 7,55455
40ewG 241 8,57953
41agl 240 7,51027
41cQN 242 9,06343
4JZKR 246 6,64939
4L2zi 244 5,80789
4UdDO 207 8,70112
4uffc 339 9,39474
4yvyE 244 6,22685
4yyrF 247 6,37946
5JVW1 242 9,30029
5K6jB 322 8,83231
5K8n0 243 8,34887
5L6VK 302 8,98755
5Lrw8 243 8,91877
5Mkmd 236 6,13301
5NiBt 239 5,90684
5NwnP 321 8,81633
5NxaO 252 9,03713
5PKsK 304 8,81265
5PXTq 242 9,50208
5Qk3e 247 8,38136
5QvRb 247 5,80777
5RsIG 296 5,74889
5RsfD 296 5,74889
5Rus8 243 8,57483
5T1D9 331 8,88241
5TDwp 247 7,57848
5Tlgx 303 7,63776
5TwMg 223 8,08435
5UA3O 247 9,02907
5UAQ9 248 8,38129
5UOLD 236 5,98864
5UhHz 304 8,29961
5WAW3 330 9,66222
5WsAS 243 8,68326
5WuwE 247 8,07855
5XWa0 332 8,85198
5XkDu 304 8,80002
5YxNJ 354 8,90671
5Zu7i 236 6,22935
601Pn 244 8,01769
60NM9 290 8,53260
60Scx 244 6,98031
60uBW 304 7,58860
60ydr 304 8,46491
60zun 244 8,02175
62R7q 187 4,96911
62S1S 252 5,74838
62tZ0 247 8,08732
62ybe 247 7,57575
630dp 248 8,38129
63fYd 222 6,43198
63ldJ 247 8,56915
647t0 296 6,10584
64INZ 244 6,93790
653si 302 6,71890
66jTm 245 9,20436
68p8b 244 6,98031
68tyx 304 8,45601
698G0 247 8,56348
69VZ0 236 6,12033
6YQbd 323 7,15406
6Zh0B 242 9,23479
6ZkZQ 245 8,69616
6a92M 316 7,62134
6aeIg 303 7,07631
6asHF 354 9,01263
6bIme 302 8,16603
6ccTA 316 8,44325
6cpUL 243 8,04154
6d25p 248 6,23685
6eByW 306 6,46091
6ehvw 248 8,03291
6fAyF 331 8,84469
6fMdw 222 6,88902
6fa6J 236 5,77418
6fhJn 247 5,54262
6fq9e 247 7,57444
6fyDQ 242 7,95219
6gJ28 244 7,99564
6gs9B 316 5,75952
6hZzC 304 8,45601
6hslO 296 5,91963
6i2Pd 236 5,98613
6iFln 353 8,29942
6imcg 248 7,57819
6jAWz 243 7,54887
6jUIu 243 6,52690
6jdMH 237 8,02988
6jpCa 331 8,72923
6k5c2 236 5,98488
6k9sZ 244 7,99887
6kXhb 245 9,40950
6knkt 223 6,94359
6l1g5 302 8,37543
6l7pb 303 8,33430
6l8Ce 250 8,64671
6m0Bx 296 5,74889
6m0lt 247 8,08287
6mFov 237 7,49385
6nxrb 248 6,40112
6o89I 316 6,33240
6pYGl 241 5,31788
6pcbf 304 8,00409
6pgit 247 8,08287
6q0c7 343 9,22757
6qKma 248 8,55136
6rMip 303 7,58701
6roNT 276 9,10431
6sOZz 242 9,27012
6svlj 331 9,59543
6tyS6 247 8,58160
6uV7v 248 5,42775
6ug3z 236 8,03355
6voPM 353 7,59974
6wOPP 243 6,53861
6wl8e 247 7,03618
6wnZU 247 7,03544
75Ugf 253 9,26760
7BMQM 241 9,40815
7Bivm 316 7,61855
7DJ4m 247 8,95081
7NELC 354 9,02540
7NQEy 243 7,51857
7QHN4 316 6,11164
7WGNF 243 8,34390
7XcXN 241 6,82303
7XhFY 304 8,46046
7Y4IX 316 6,61062
7YA7y 241 7,55080
7aLK1 354 9,05647
7dZTC 242 8,85610
7kUms 229 6,27101
7qBTB 302 8,76262
7qzGY 298 8,95164
7rVQl 245 9,59427
7vJMk 314 9,50891
7xQBt 252 9,36250
7xQDo 251 9,07813
7xQFC 303 8,11362
7xRdc 242 9,40802
829zv 242 7,50095
82RM2 314 5,93094
82zQ4 304 8,41868
840lN 279 9,47764
84PtJ 402 8,74425
84TNa 247 7,02862
84V4Q 286 9,39138
84gXx 403 8,92528
85jhs 248 6,99287
862QA 302 8,59481
86sc5 316 7,61855
87Y3h 316 6,11164
88L2 240 11,97270
8b10Y 354 8,87261
8cbNB 243 7,99551
8dgop 244 8,47419
8dhaR 316 8,76224
8eO9t 236 9,46971
8lSuy 276 9,52793
8lcbe 316 7,63594
8meb1 316 6,11164
8oRvt 316 7,00662
8qX0f 316 8,14534
8qnCB 253 8,77326
8qngl 212 9,09689
8qzzf 327 8,94526
8rETl 241 8,97672
8rhek 244 8,30844
8vSy9 316 7,00873
BAFK 247 6,52980
D4KX 272 5,81596
MW2U 243 7,54097
N1HQ 244 6,96178
Nm5W 316 6,61051
O58q 244 6,14432
O7k7 247 8,07861
m0bB 251 9,03249
mYiF 241 8,74380
n0T7 241 8,74393
n2O1 246 8,94210
naKJ 241 8,04509
niOl 274 9,41182
nohE 240 8,70247
npRB 246 8,68990
o5mY 241 8,48348
oOmG 244 6,96053
ohsb 246 6,99275
oiYo 240 8,97647
oj1f 243 8,72252
oltO 241 8,07990
omki 213 8,28743
orfi 246 8,56838
osyQ 246 8,35493
wZ2U 354 9,02540
zlNC 316 7,00605
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13879
7z7dc
 255 58,9% 178 2.140E-84
2 phalp2_14253
3dTBY
 751 54,8% 195 1.938E-83
3 phalp2_11417
eYHn
 21 57,4% 195 1.064E-77
4 phalp2_38408
13xIA
 10 46,4% 211 9.745E-74
5 phalp2_16558
7rWDg
 20 52,0% 167 2.284E-69
6 phalp2_37301
7Ya12
 3 49,7% 171 1.862E-67
7 phalp2_25038
13C0m
 57 55,9% 152 1.107E-65
8 phalp2_18793
1bS71
 24 35,7% 179 5.018E-44
9 phalp2_39194
3fUf1
 5 33,5% 194 6.861E-44
10 phalp2_33479
7swgL
 97 37,9% 166 3.276E-43

Domains

Domains
Ami2
Unannotated
Representative sequence (used for alignment): 3wjGA (244 AA)
Member sequence: 5Ym5q (248 AA)
1 244 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3wjGA) rather than this protein.
PDB ID
3wjGA
Method AlphaFoldv2
Resolution 94.17
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50