Protein

Protein accession
5Ylyw [EnVhog]
Representative
2bNeh
Source
EnVhog (cluster: phalp2_40197)
Protein name
5Ylyw
Lysin probability
99%
PhaLP type
endolysin
Probability: 92% (predicted by ML model)
Protein sequence
MSYKPLTAENCKDFKNFKYSEFKCKCGSKYCNGYPVPFSYDLAKNLQAIRTHFGKPLIITSPLRCETWNSKQGGVKNSKHKKGWACDFYVKGISYNALAKYVKTLPYFNYCYRINKNQDVIHYDITPPSYTEPSKVDTKEELINSLNAQISDLNSKIKEQDSQILNLKSQISEKEATIEELNNKLIDSACKHKLLYKCEKNGKYKVQLFENEVLYIESNK
Physico‐chemical
properties
protein length:220 AA
molecular weight:25496,9 Da
isoelectric point:9,08
hydropathy:-0,72
Representative Protein Details
Accession
2bNeh
Protein name
2bNeh
Sequence length
200 AA
Molecular weight
22406,17090 Da
Isoelectric point
9,42504
Sequence
MAFKIVDDSNIKNFKNFTMNELKCKCGGKYCNGYPTGFSYELLRQLQDIRNHFGRAVIITSAVRCEQHNKNVGGVNNSKHAQGRAVDFYVKGVSYSTLNSYVNKMPYKNYKYNISGSVMHYDINPPEESTFNLTRLLKKGCKGKDVEELQETLGGLAVDGIFGNNTKSKVKSFQKANGLYQDGKVGKNTAHALGWTYKGE
Other Proteins in cluster: phalp2_40197
Total (incl. this protein): 8 Avg length: 207,4 Avg pI: 9,41
Protein ID Length (AA) pI
2bNeh 200 9,42504
23dbW 179 9,88018
23h2q 188 9,60903
3ZwL0 216 9,72946
3kulm 219 8,78235
4klA7 210 9,60742
5S5LZ 227 9,18792
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_40479
4y8zU
 266 34,7% 210 7.922E-29
2 phalp2_24864
3s40
 583 33,6% 205 1.720E-24
3 phalp2_11660
1FFlu
 17 28,1% 227 4.432E-17
4 phalp2_851
81eBD
 22 31,1% 151 1.523E-12

Domains

Domains
PET_M15
PG_1
Representative sequence (used for alignment): 2bNeh (200 AA)
Member sequence: 5Ylyw (220 AA)
1 200 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF08291

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5Ylyw
Method AlphaFoldv2
Resolution 89.35
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (2bNeh) rather than this protein.
PDB ID
2bNeh
Method AlphaFoldv2
Resolution 93.19
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50