Protein

Protein accession
5Yam3 [EnVhog]
Representative
7w4x3
Source
EnVhog (cluster: phalp2_26095)
Protein name
5Yam3
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSNSPLVSYTRISPCKNPRNHKIDTITIHCVVGQASVEGLGALFANYDTQASSNYGIGADGRIGMYVEEKDRSWCSSSSSNDHRAITIECASDAYYPYAINDAVYGSLIDLLVDICIRNGIDSLKWKADKSLIGYPEEQNMTVHRWFYNKSCPGDYIYDRLYDIAAEVNERLEDYYMTQDTFNKMFDTAMARYRAQLQDNDASNWSKEARGWAVKNGLIAGSSDVEFNGMWEDYMTREQLVAVLYRFAELMGK
Physico‐chemical
properties
protein length:253 AA
molecular weight:28742,8 Da
isoelectric point:4,90
hydropathy:-0,45
Representative Protein Details
Accession
7w4x3
Protein name
7w4x3
Sequence length
332 AA
Molecular weight
36797,17790 Da
Isoelectric point
6,39390
Sequence
MANRIKNWITKISSFRNSPRNHAVDTITIHCVVGQMGVESLCSHFQVANCSCNWAIGFDGRVAEIVPEGDRSWCSSSPANDHRAVTIECASDAFYPYAINANVWNTLIGLCADICQRHNIKELKWMGDKGLIGQVGLQNMTAHRWFANKSCPGDYIYNRLGQIAKEVNQKLGGAPAVPFKAYQGQVNATDGLNCRTSPANGTVLKAYPDGTVLTITQENGGWGYTGEGWVCLDYINKIASAKDPAEKEESIMEGKQFKKLFDEMRQQWHDNDASKYSKEARQWAVDSGLVVGGSAEEFNGMWEDLMTREQLVTVLYRFAKMMGAVPTSDSSK
Other Proteins in cluster: phalp2_26095
Total (incl. this protein): 24 Avg length: 269,5 Avg pI: 5,54
Protein ID Length (AA) pI
7w4x3 332 6,39390
408b5 263 5,74491
5VxI5 253 4,97582
5WPjv 253 5,06409
5XmG8 223 4,49252
67XTq 253 4,89437
6934U 223 4,56328
6iuJe 253 4,97582
6lDLX 253 4,92154
6nH6p 253 4,91057
6ou3o 253 5,06404
6qeH9 253 5,17612
6uDyr 253 5,06404
6vFVG 253 4,99634
6wuPn 253 5,17618
70JK5 256 4,98759
7vFhJ 325 7,39625
7vFks 328 8,30612
7w5kt 322 8,08835
8b81F 253 5,17078
8tMC7 253 4,91057
ngbY 331 6,24919
o7CN 324 6,45227
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8931
3gTAK
 6 43,6% 321 4.428E-95
2 phalp2_1650
8m87G
 265 44,0% 252 3.387E-78
3 phalp2_10709
38IkX
 3 47,6% 210 7.579E-74
4 phalp2_12977
3h4lU
 700 44,8% 250 1.096E-68
5 phalp2_37002
o6En
 47 32,7% 342 3.450E-47
6 phalp2_29674
8k36v
 96 39,5% 205 1.417E-45
7 phalp2_10280
1cMFf
 75 30,9% 242 5.070E-26
8 phalp2_30585
5Zqsx
 178 26,1% 237 1.274E-18
9 phalp2_18388
5HE4u
 2 19,1% 214 4.107E-04

Domains

Domains
Ami2
Unannotated
Unannotated
Representative sequence (used for alignment): 7w4x3 (332 AA)
Member sequence: 5Yam3 (253 AA)
1 332 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (7w4x3) rather than this protein.
PDB ID
7w4x3
Method AlphaFoldv2
Resolution 88.02
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50