Protein

Protein accession
yc5a [EnVhog]
Representative
yc5a (this protein)
Source
EnVhog (cluster: phalp2_22405)
Protein name
yc5a
Lysin probability
99%
PhaLP type
VAL
Probability: 66% (predicted by ML model)
Protein sequence
MTPFAAKVAETARAIGMDPLDLATIISYETGGTFDPMQSGPTTQWGQHRGLIQFGEPQARQYGVDWASPEASQLGPDGAIAKYFTSNGYKPGMGLLDAYSIVNAGAPGRYNASDANNGGAPGTVADKVNSQMSGHRANAERLLGLSFGDMPNSTQAMDQIGWNSGTPIEQSPWDTASGILGAFSDMYAQAPEPPQIQPRQVAQYTPQKRENSALLQFLASLR
Physico‐chemical
properties
protein length:222 AA
molecular weight:23599,9 Da
isoelectric point:4,83
hydropathy:-0,46
Other Proteins in cluster: phalp2_22405
Total (incl. this protein): 26 Avg length: 241,6 Avg pI: 6,83
Protein ID Length (AA) pI
1Y4tS 241 5,64078
4FKFu 220 6,74062
4Uost 230 6,90613
4W9Bv 312 4,60154
4f09g 246 5,30924
5ElI5 234 8,92154
6BHBX 234 8,82967
6Evl4 292 6,31216
6SS2y 249 5,64107
6W8S4 242 6,28971
72qsQ 243 6,83537
756b9 244 8,04941
756cu 243 8,04941
7dB53 236 9,12358
7dC2Q 243 8,07533
7kSLW 243 6,83537
7nSVF 243 9,09148
7o1AV 242 6,27834
7rNgB 250 5,37881
7ss7I 246 6,73033
7wTNn 250 5,76389
7zIuP 243 8,07520
8EeUT 186 6,97576
8lZqk 194 5,45043
sekv 254 6,83991
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27255
3YXF6
 5 63,6% 176 9.419E-80
2 phalp2_19276
81lX1
 21 80,0% 145 6.233E-79
3 phalp2_33929
231YV
 4 76,2% 143 4.124E-78
4 phalp2_17784
97m5
 34 49,5% 206 1.510E-71
5 phalp2_29252
8F6ny
 1 62,9% 151 6.147E-63
6 phalp2_18222
4OE6Z
 2 46,7% 203 3.315E-60
7 phalp2_18130
4fGQC
 122 32,0% 203 7.357E-25
8 phalp2_12403
8Dr7M
 3 34,3% 163 5.625E-23

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
yc5a
Method AlphaFoldv2
Resolution 75.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50