Protein

Protein accession
yRbL [EnVhog]
Representative
yRbL (this protein)
Source
EnVhog (cluster: phalp2_32384)
Protein name
yRbL
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
GDHWNDVAGEDMSFPRRLKKALKENIPGGKVKYFRGWKKNYTGPWLGANKLPVALMLHHTAGAATESTSPKAAGNQTGANSGIVNFVQNHYRVPAANFTLDRDGTVYVHAANPIWHAGVGSFKGKKPWDILGCKDNQGNRYMMGVEIVSKGKKKDFTKAQKEALKGLQEAVGEAALWPVQKRRAKVRRPRHKDWTQRKIDIIYDHPEIDEWMK
Physico‐chemical
properties
protein length:213 AA
molecular weight:23956,1 Da
isoelectric point:9,92
hydropathy:-0,76
Other Proteins in cluster: phalp2_32384
Total (incl. this protein): 80 Avg length: 203,4 Avg pI: 10,03
Protein ID Length (AA) pI
16qR5 201 10,67250
17NZP 282 9,56455
1A2yW 198 10,15733
1A73v 204 10,22148
1A98G 198 10,33868
1AMD5 206 10,08352
1DaZ3 201 10,96925
1VSxH 206 10,17919
1VVNa 205 10,29078
1g8fF 205 10,42114
1o9Au 204 10,17164
1pcQq 202 9,53483
1t7AN 207 10,30683
1yeRS 201 9,75711
1zVSs 198 10,50888
24UEX 207 9,14312
269iD 161 9,96586
27kFI 203 10,32985
2GhH1 200 10,40670
2Tawu 201 11,14924
2Tc5l 204 11,06917
2UNR7 199 10,21464
2cKU7 207 9,11900
2eLKY 198 10,36305
2hjz3 198 10,33868
2x9q0 217 10,07797
37ItS 202 9,01031
38hLq 206 9,62792
3QMUS 201 10,11291
4AcaP 200 10,25951
4Ae64 200 10,06669
4DsX 202 10,88441
4NUET 200 9,82932
4WBDN 200 10,47780
4WNFC 200 10,78609
4fTtt 214 10,16571
4jkCd 198 10,36924
4obfq 200 10,39348
4rf4X 199 9,79592
4zUV1 200 10,17925
4zWBe 199 10,15553
4zWD7 200 10,28092
5BuTe 201 9,63327
5IbYW 212 9,38745
5bb1H 180 9,49299
5doaG 202 8,80279
5iFYp 206 7,74661
5l2dN 215 10,46066
5lnD3 203 9,96090
5yJ93 202 11,30629
6LIlk 201 10,03549
6PFiH 244 8,84308
6PMYV 210 9,63540
6QXSW 203 10,14315
6UCkf 158 8,63008
6wSki 206 9,70728
6wTRu 192 9,13551
6ydj1 200 9,64281
7DsEa 198 10,18725
7IiPl 201 11,36373
7XO9C 206 9,70837
7fey 201 10,87377
82nfS 198 10,42088
84JfU 198 10,23592
8EgEn 198 10,18725
8fMh1 210 9,85285
8fmHh 210 9,78677
8sslC 202 9,05350
8tbzJ 210 9,71875
Av65 201 9,93917
BieQ 200 10,72743
imf9 201 10,77791
jWPF 201 9,77413
jojZ 244 9,02456
t9Jj 208 10,43332
uGu6 198 10,33868
xeX8 205 9,81146
xzk5 202 9,41820
yN5w 201 10,69461
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31577
4jmue
 2 50,0% 130 7.248E-59
2 phalp2_38115
6Mgp6
 3 50,0% 150 2.551E-58
3 phalp2_8819
2pCLP
 4 35,8% 201 4.401E-42
4 phalp2_30054
2ICDq
 63 32,6% 202 4.462E-21
5 phalp2_24508
4NNU3
 22 24,2% 194 8.507E-19
6 phalp2_35081
5cImK
 1 28,9% 166 4.625E-15
7 phalp2_32798
2yYOK
 118 22,7% 202 1.921E-10
8 phalp2_14937
8JOmU
 50 26,8% 175 1.168E-09
9 phalp2_23990
3N62q
 1 24,1% 207 3.148E-08
10 phalp2_6052
7IofZ
 9 23,2% 185 5.716E-08

Domains

Domains
Ami2
Protein sequence: yRbL
1 213
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
yRbL
Method AlphaFoldv2
Resolution 93.60
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50